Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01382 ATGGATGAGAGGAATTGTATATCTGAGGAAGACAAGAGTGAAAGTAGCAAACCCTCTTCTGCAATTCTTAGAAGAAAACGTTCTTTCTTGGATTTGAATGAAGAAGCTGCGGATGATGGAGATGGTAGCACCAGTGATGACCCCATCAGTATCAATGACATATCATCTCAAGAGGGTAATTTGAGCAGTAATAACTCAAGTGAAGAAGGGAAAGAGCGTGCAACTGCTGTTAGGCAATATGTTCGGTCCAAAATGCCAAGACTCCGTTGGACTCCTGATCTTCATTTAGCTTTTGTGCATGCTGTTGAGAGGCTTGGTGGACAAGAAAGAGCAACGCCCAAGTTGGTTCTCCAGTTGATGAATGTGAGAGGACTTAGCATTGCACATGTAAAGAGCCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGAGTCTGGCCAAGTTTTATCTCAGAATAAGGCAATGCAAGGAAGGCATAGTATTTTCGATATGTACGGAAGACTTAATGCCCCACGACACTTTGTGGTTGATAACAGAAATTATATTCCATCATCTCTGCTCATTCAACAATCACCTTATCAGATCAGTGCTCATGGCTCCTCAAGATCACACCCCACAGGGTTTTTCAATGGTCACATGATGATAAGATCAAGTTCAATGTGGGACAAAGATTTGTGTAATTATCAGTATCAACGTAGTTCTTGCAGTCCTAACTTCGCTGGCCACGCTAAGTTTGATGCCGAGGTTCGTGATGTGAAAAATCGAATGCCAGAATTCCTAAATCAGGCTCAAGTATGGAAACAGGGTCAAGTAAAAGATGAATTAGAGAGGTTGAATGAGAAAAAAGGGTCTCCAAGTTTTTTGGAGCTGAATTTAAGTCAAGATTCAAGAAACATTAATAGTGATGACCAGATGAACAAAGATCCAGCAGAAAGTGAACAAGAAATTAATACCAGACTCTCTCTTTCACTGTTCACTTCTTCGTCCTCAAATTCATCACAACAAGCACAATGTAGTGAAAATCATAAAGACGATACCCATGTTGAGAGTTTTTGTTTACAAAATTATGCACCAAGGAGTCGTTTGGGCTGA 1092 0.4038 MDERNCISEEDKSESSKPSSAILRRKRSFLDLNEEAADDGDGSTSDDPISINDISSQEGNLSSNNSSEEGKERATAVRQYVRSKMPRLRWTPDLHLAFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNKAMQGRHSIFDMYGRLNAPRHFVVDNRNYIPSSLLIQQSPYQISAHGSSRSHPTGFFNGHMMIRSSSMWDKDLCNYQYQRSSCSPNFAGHAKFDAEVRDVKNRMPEFLNQAQVWKQGQVKDELERLNEKKGSPSFLELNLSQDSRNINSDDQMNKDPAESEQEINTRLSLSLFTSSSSNSSQQAQCSENHKDDTHVESFCLQNYAPRSRLG* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01382 363 MobiDBLite consensus disorder prediction 1 21 - -
Phac5g01382 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 142 IPR017930 -
Phac5g01382 363 Gene3D - 85 142 - -
Phac5g01382 363 FunFam Myb family transcription factor 84 142 - -
Phac5g01382 363 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 64 273 IPR046955 GO:0003700
Phac5g01382 363 MobiDBLite consensus disorder prediction 1 75 - -
Phac5g01382 363 MobiDBLite consensus disorder prediction 286 300 - -
Phac5g01382 363 MobiDBLite consensus disorder prediction 45 70 - -
Phac5g01382 363 Pfam Myb-like DNA-binding domain 88 138 IPR001005 -
Phac5g01382 363 MobiDBLite consensus disorder prediction 279 315 - -
Phac5g01382 363 NCBIfam myb-like DNA-binding domain, SHAQKYF class 86 141 IPR006447 GO:0003677
Phac5g01382 363 SUPERFAMILY Homeodomain-like 84 140 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01382 Phac-Chr5 33108745 33113284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01382 77 211 G2-like Transcription Factor Family AT2G42660 52.143 1.20e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac5g01382 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01382 - - vun:114183967 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01382 5 33108745 33113284 Phac5g01382 5 33108745 33113284 ECH