Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01374 ATGTCTGCTCCTGTCGCAGAGGGTAATGAAGCACATGCACTCACTGGTCATATAATCTCAACCACAATTGGTGGAAAAAATGGTGAACCTAAACGAACTATCAGTTACATGGCCGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGGCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGATACAAAAACCGGGAACTGCAGTTAATGCGCATGATGGATCACCCAAATGTAATTTCCCTGAGGCACTGTTTCTTCTCTACAACAAGCAGAGATGAGCTTTTTCTGAACTTGGTGATGGAATATGTCCCTGAGACGATCTACCGAGTTATAAAGCACTACAGTAGTATAAACCAGAGAATTCCCCTAATCTATGTGAAATTATATACATATCAAATCTTTAGGGGACTGGCATATATCCATACCGTACCAGGAGTTTGCCATAGGGATGTGAAACCTCAAAATCTTTTGGTGGATCCACTCACACATCAAGTCAAGCTTTGCGATTTTGGGAGTGCAAAAGTTCTGGTGAAGGGTGAATCCAACATCTCATACATATGCTCACGGTACTATCGGGCCCCAGAACTAATATTTGGTGCGACAGAGTACACAACTTCTGTTGATATCTGGTCAGCTGGTTGTGTCCTTGCAGAACTTCTTTTAGGCCAGCCTTTGTTCCCGGGAGAAAATCAGGTCGACCAACTTGTTGAAATTATCAAGGTTCTTGGCACTCCTACTCGAGAAGAAATTCGATGCATGAACCCTAATTATACAGATTTCAGATTCCCCCATATCAAAGCTCATCCTTGGCATAAGGTTTTTCACAAGCGAATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAGTATTCACCAAAACTTCGTTACAGCGCAGTGGAAGCATTGGCACATCCTTTCTTTGACGAGCTTCGTGAGCCCAATGCTCGGCTACCTAATGGTCGTTTATTGCCTCCGCTTTTTAACTTCAAACAGGAATTAGATGGAGCGCCCCCTGAACTGCTCCCTAAGCTCATCCCGGAGCACGTCAGACGGCAGATCGGTTTCGGCTTGCTGTACTCGACGGACACGCAAACTCAAGTGTAA 1143 0.4514 MSAPVAEGNEAHALTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRMMDHPNVISLRHCFFSTTSRDELFLNLVMEYVPETIYRVIKHYSSINQRIPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSVDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPHIKAHPWHKVFHKRMPPEAIDLASRLLQYSPKLRYSAVEALAHPFFDELREPNARLPNGRLLPPLFNFKQELDGAPPELLPKLIPEHVRRQIGFGLLYSTDTQTQV* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01374 380 FunFam Shaggy-related protein kinase kappa 116 363 - -
Phac5g01374 380 Gene3D Phosphorylase Kinase; domain 1 21 115 - -
Phac5g01374 380 SMART serkin_6 36 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01374 380 ProSitePatterns Protein kinases ATP-binding region signature. 42 66 IPR017441 GO:0005524
Phac5g01374 380 Gene3D Transferase(Phosphotransferase) domain 1 116 363 - -
Phac5g01374 380 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 11 365 - -
Phac5g01374 380 SUPERFAMILY Protein kinase-like (PK-like) 35 343 IPR011009 -
Phac5g01374 380 FunFam Glycogen synthase kinase-3 beta 20 115 - -
Phac5g01374 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Phac5g01374 380 Pfam Protein kinase domain 36 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01374 380 CDD STKc_GSK3 31 323 IPR039192 -
Phac5g01374 380 ProSiteProfiles Protein kinase domain profile. 36 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01374 Phac-Chr5 32987045 32991269 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01374 40 350 MAP Kinase Gene Family AT3G59790 35.890 8.86e-59 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Phac5g01374 Pkinase 6.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01374 K14502 K00924 gmx:100788319 726.472