Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01370 ATGGCCTCTATGCCGTTGGGGCAGCAGCAACAGCTTCAACCACCGCAAGTGGCAACTCCGCCGCAACAACCGTCGCAAGCGGAGAATGACTCTATGAAAGTGGACTCTCGCGGCGGCTCTGACGCCGCCTCCAATAAGGAAATGTCTGCTCCTGTCGCAGAGGGTAATGAAGCACATGCACTCACTGGTCATATAATCTCAACCACAATTGGTGGAAAAAATGGTGAACCTAAACGAACTATCAGTTACATGGCCGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGGCAGTGGCTATAAAGAAGGTCTTGCAGGACAGGCGATACAAAAACCGGGAACTGCAGTTAATGCGCATGATGGATCACCCAAATGTAATTTCCCTGAGGCACTGTTTCTTCTCTACAACAAGCAGAGATGAGCTTTTTCTGAACTTGGTGATGGAATATGTCCCTGAGACGATCTACCGAGTTATAAAGCACTACAGTAGTATAAACCAGAGAATTCCCCTAATCTATGTGAAATTATATACATATCAAATCTTTAGGGGACTGGCATATATCCATACCGTACCAGGAGTTTGCCATAGGGATGTGAAACCTCAAAATCTTTTGGTGGATCCACTCACACATCAAGTCAAGCTTTGCGATTTTGGGAGTGCAAAAGTTCTGGTGAAGGGTGAATCCAACATCTCATACATATGCTCACGGTACTATCGGGCCCCAGAACTAATATTTGGTGCGACAGAGTACACAACTTCTGTTGATATCTGGTCAGCTGGTTGTGTCCTTGCAGAACTTCTTTTAGGCCAGCCTTTGTTCCCGGGAGAAAATCAGGTCGACCAACTTGTTGAAATTATCAAGGTTCTTGGCACTCCTACTCGAGAAGAAATTCGATGCATGAACCCTAATTATACAGATTTCAGATTCCCCCATATCAAAGCTCATCCTTGGCATAAGGTTTTTCACAAGCGAATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAGTATTCACCAAAACTTCGTTACAGCGCAGTGGAAGCATTGGCACATCCTTTCTTTGACGAGCTTCGTGAGCCCAATGCTCGGCTACCTAATGGTCGTTTATTGCCTCCGCTTTTTAACTTCAAACAGGAAGTATGTATCTAA 1188 0.4554 MASMPLGQQQQLQPPQVATPPQQPSQAENDSMKVDSRGGSDAASNKEMSAPVAEGNEAHALTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRMMDHPNVISLRHCFFSTTSRDELFLNLVMEYVPETIYRVIKHYSSINQRIPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSVDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPHIKAHPWHKVFHKRMPPEAIDLASRLLQYSPKLRYSAVEALAHPFFDELREPNARLPNGRLLPPLFNFKQEVCI* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01370 395 SUPERFAMILY Protein kinase-like (PK-like) 82 388 IPR011009 -
Phac5g01370 395 MobiDBLite consensus disorder prediction 1 33 - -
Phac5g01370 395 SMART serkin_6 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01370 395 Gene3D Transferase(Phosphotransferase) domain 1 163 394 - -
Phac5g01370 395 ProSiteProfiles Protein kinase domain profile. 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01370 395 FunFam Shaggy-related protein kinase kappa 163 395 - -
Phac5g01370 395 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 45 392 - -
Phac5g01370 395 Pfam Protein kinase domain 83 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01370 395 CDD STKc_GSK3 78 370 IPR039192 -
Phac5g01370 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Phac5g01370 395 FunFam Glycogen synthase kinase-3 beta 67 162 - -
Phac5g01370 395 ProSitePatterns Protein kinases ATP-binding region signature. 89 113 IPR017441 GO:0005524
Phac5g01370 395 Gene3D Phosphorylase Kinase; domain 1 68 162 - -
Phac5g01370 395 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01370 Phac-Chr5 32987045 32992199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01370 87 389 MAP Kinase Gene Family AT3G59790 35.849 3.68e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Phac5g01370 Pkinase 7.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01370 K14502 - gmx:100806839 705.671