LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac5g01322	ATGAAGCACTTTGGAATGGCTATTCAACAATTTATGGGTATCACAAAGGTTATCTTTTGCAGCATTTTGGTTTTTCATATTTTGGCCGTAGTCAGCAGTGAAGAGAAGAAAACTCAAGAAGAATTCATTAGCCAACTATTTGATCCTACATCTGGACTATTAACTGAGGATACGGCTGAGGTACTATGGATCATATGTTGGGAAGATTTGATTCGATTAAAGAAAGAAGTCGACGAATTTGGCTTTTGCCTCCCAAGGGAATTATGCAGAAACACCAATCATGTTAGTTTAGAAATTGGCTCAGTAGCTAGAGAAAACATCCAAAAAATAATTAATGCATGTTGTCCTCAATTGAAGGAAAATGTTCTTAACTGTTTTAGAAAAAACAATTTTCCATTCCATCCTCTCAAGGAAGAGGCTGTCTCCAAGATTTGGCATGCAACATACATGGGATCACCTTCATCTAGAAGATATTTGGGTCAAATTTTGCCCCAGCACCTATCTGAAATACCAAACAAGGAACATAAATTACATACAAATATTAAAGATCAAGACTCTGCATCTAAATCTTCCCACTCTAAGGATAAAGATAAAGCATCTGGGACTAGTATGGCAATACCTATAGTGGTAGCATTTGTAGCTGCAGCATTGCTCATTTTATGTTGTTATCGATTTTGTGGGAGTGGACAAGTTAGCCAAAATGATGAGAGACCCCTTCTCAGCATGAGCATGAACGAATACTCAGTTGGTTCTTCTTCGAATAATAATATTGCATTCCAAAATTCAATGAAAGGACCAATTGGGATTCACTCATCAAGTATTCAATTGGTTGATGAGAAGAGGAAGTCAGTCTCGGTGCATGAAGCTCAATTAGGAGAAATTGCTAATGCTTCTTTTGTAAGACCATCATTTGAACTAAAACCTCCTCCTGGGAGAGCAGTAGTAAATGGATTGCTTCCTTTGAAACCTCCTCCTGGAAGGCCTGATCTTCTTCCTCCTCCTGAACCAATTAAACCTCCTGATGATCCCATTGTTCCTTCACCACCTGCTCCGCCTGCTCCACCTGCTCCAACTTCTCCTTCTCCTCCTCCTCCCCCTCCTCCTCCTCGTCTTCAAACACCACCAAAGCCCACCAATGCTGGCCCTCCACCTCCTCCACCTCCTAGGAATGGCCCTAGACCACCACCCCCTCCCCCTGGCAAAGGCCCCAGAGCTCCACCACCACCACCACCTAGATCCAAGGGTGGTCCTGGTGCTGGTCCTAGACCTCCTCCACCCCCCAGAAGTGGTGCAGGTCCCCCAAAAGCTCCTTCCGGTAAGGTTGTTGAGGAAGAACCCGACTATGAAGGTGAAGGGTATGTTCCTAAAGCTAAGTTAAAGCCTTTCTTCTGGGATAAGGTTCAAGCTAACTCAGATCAAACAATGGTATGGAATCAACTCAAAGCAGGATCGTTCCAGTTTAATGAAGAAATGATGGAGACACTCTTTGGCTATAATGCCATGGCAGCGGATAAAGGAAAAGGCCAAGCAAAAAAAGAGGCTGCCTCCCAACCAGCTACTCCCCAACTTATACAAATCATTAACTCAAAGAAAGCACAAAATTTATCTATTCTATTAAAAGCATTGAATGTGACCTCAGATGAAGTTTGTGATGCACTTCTTGAAGGAAATGAGCTCCCCACAGAATTCCTTCAAACCTTGTTGAAGATGGCACCAACGTCAGAGGAAGAACTTAAGCTTAGAGTTTTCACTGGTAATACAGCCCTACTCACCCCTGCAGATAGGTTCCTTAAAGCCGTAGTTGACATTCCCTGTGCTTATAAACGAATGGAAGCTCTAATTTATATGGGTACTCTTCAAGAGGATCTCACTAATACTCGAGATTCCTTTGCAATTTTAGAGGTTGCTTGTAAAAAGCTAAGAAGCAGTCGATTATTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAATCGTATGAATGATGGGACATTCCGTGGTGGTGCACAAGCATTCAAACTCGATACACTGTTGAAATTATCTGATGTAAAAGGAGTAGATGGCAAGACCACGCTCTTGCACTTCGTTGTTCAAGAGATAATGCGCACTGAGGGCATAAGAGCTGCACGCATGGCAAAAGAGAATCACAGTTTCTCCAGCATAAAAACAGAAGACCTTCTTGAGGACTTCTCATATGAATCAGATGACCACTATCGTGAACTTGGTCTTCAAGTGGTTTCACGATTAAGCACTGAACTTGAGAATGTGAAGAAAGCAGCAGCTTTAGATGCTGATGGCTTAGTAGGAACAACTTCAAGACTAGGGCATGGTCTCATAAAAACAAGAGACTTCGTAATCAATGACATGAGAAACGTGAAGGGTGATAAAGGGTTTTATGAGACAGTGAAGAGTTTCGTGGAGAAAGCTGAGGCTGATGTCAAAAGTTTGCTAGAAGAGGAGAAGAAAATCATGGGTCTAGTGAAGAGCACTGGTGATTACTTTCATGGGGATTCAGGGAAGGATGAAGGGCTGAGATTGTTTATAATAGTACGTGATTTCTTAGTAATGTTGGATAAGGTGTGCAAGGAGATACAACTTGCACCACCAAAGAAGCCAACAGCAAAAAGTGCAAAGCAAGAAACACCTAATCATTCTAGAAAACCTTCTTCCTCTGATACTCTTCCTCCTTCTCATGATTTAATGCGTCAACGAATTTCTCCAGCAATCGCAAATAGGAGGATGGATGACTTTAGTTCAGATGATGAGAGTCCTTAG	2775	0.422	MKHFGMAIQQFMGITKVIFCSILVFHILAVVSSEEKKTQEEFISQLFDPTSGLLTEDTAEVLWIICWEDLIRLKKEVDEFGFCLPRELCRNTNHVSLEIGSVARENIQKIINACCPQLKENVLNCFRKNNFPFHPLKEEAVSKIWHATYMGSPSSRRYLGQILPQHLSEIPNKEHKLHTNIKDQDSASKSSHSKDKDKASGTSMAIPIVVAFVAAALLILCCYRFCGSGQVSQNDERPLLSMSMNEYSVGSSSNNNIAFQNSMKGPIGIHSSSIQLVDEKRKSVSVHEAQLGEIANASFVRPSFELKPPPGRAVVNGLLPLKPPPGRPDLLPPPEPIKPPDDPIVPSPPAPPAPPAPTSPSPPPPPPPPRLQTPPKPTNAGPPPPPPPRNGPRPPPPPPGKGPRAPPPPPPRSKGGPGAGPRPPPPPRSGAGPPKAPSGKVVEEEPDYEGEGYVPKAKLKPFFWDKVQANSDQTMVWNQLKAGSFQFNEEMMETLFGYNAMAADKGKGQAKKEAASQPATPQLIQIINSKKAQNLSILLKALNVTSDEVCDALLEGNELPTEFLQTLLKMAPTSEEELKLRVFTGNTALLTPADRFLKAVVDIPCAYKRMEALIYMGTLQEDLTNTRDSFAILEVACKKLRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVQEIMRTEGIRAARMAKENHSFSSIKTEDLLEDFSYESDDHYRELGLQVVSRLSTELENVKKAAALDADGLVGTTSRLGHGLIKTRDFVINDMRNVKGDKGFYETVKSFVEKAEADVKSLLEEEKKIMGLVKSTGDYFHGDSGKDEGLRLFIIVRDFLVMLDKVCKEIQLAPPKKPTAKSAKQETPNHSRKPSSSDTLPPSHDLMRQRISPAIANRRMDDFSSDDESP*	925

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac5g01322	924	Gene3D	Formin, FH2 domain	454	891	IPR042201	-
	Phac5g01322	924	ProSitePatterns	Serine proteases, subtilase family, serine active site.	201	211	IPR023828	-
	Phac5g01322	924	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	449	883	IPR015425	-
	Phac5g01322	924	MobiDBLite	consensus disorder prediction	180	199	-	-
	Phac5g01322	924	MobiDBLite	consensus disorder prediction	321	433	-	-
	Phac5g01322	924	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	406	865	-	-
	Phac5g01322	924	SMART	it6_source	449	872	IPR015425	-
	Phac5g01322	924	MobiDBLite	consensus disorder prediction	876	897	-	-
	Phac5g01322	924	PANTHER	FORMIN-RELATED	156	896	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Phac5g01322	924	MobiDBLite	consensus disorder prediction	316	449	-	-
	Phac5g01322	924	Pfam	Formin Homology 2 Domain	453	857	IPR015425	-
	Phac5g01322	924	PRINTS	Proline rich extensin signature	381	397	-	-
	Phac5g01322	924	PRINTS	Proline rich extensin signature	340	352	-	-
	Phac5g01322	924	PRINTS	Proline rich extensin signature	320	336	-	-
	Phac5g01322	924	PRINTS	Proline rich extensin signature	357	378	-	-
	Phac5g01322	924	MobiDBLite	consensus disorder prediction	868	924	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac5g01322	Phac-Chr5	31814207	31820061	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac5g01322	5	98	FH2 protein (formin) Gene Family	AT5G54650	32.000	1.40e-06	50.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac5g01322	-		-	vun:114183601	770