Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01299 ATGGCAGATGATCAATTTCAGGCAAGTGGGAACTGGTGGGACACAGCAAGGAACGTCAGATATGAAAGCCGGACGTCACACTCATCTTCCTCTGCCATCACCAACATAGACAACTTTGGTTGGCAAGCTTCAGATATGGCAGAAATGAAGCCAAGGTCTTCCATGGATTCTTCTTCTGTGGTTTTTCATGACTCGCAGAATAAGCTTCAACCCCCAGATTCTACAACTTCCACTGACCCCAACTTGCATATCATGGATCTAGGCCTGTCATCCCAAGCCATGGATTGGAATCAAGCATCTTTGTTACGAGGAGAGAAGGGTACTGAGAATAGTTTCAGATCGATGTTGCAAGAGAATTTGAGCTCATCAAGAACCAATTTTCAGCAAGAAACTGGGGTGGAGTTGTCTCAACAAGTTCAATGGAGGTCAGAGAAGATGTTCTCTGCAGATTCTTCAAGCAATGAGTTCAAGCAAGTGAATAGGGGCTTCTCCTTGGATCAAAGCAAGTTTAGTCCACAATATAGCTCTGGGGACAGCACAGTGACAAGCCAAGGGTTACCCTCTTCTAACTTTCAGATGGATTCCTCAGCCTTGTATGGGACCCCTTCAATATTGCAAGGACTATTGGGACCTGATCACAATAACCAACCCCAACAACAACAACCTTCTTCCTTTGAGAACCGCTCCATAAGTTTTCCATACCCAACAACCTATGGATTAAACTCTAACAATGACCTGGTCCCTTCTTGGTCCAAAGTTCCTCAATTCTTGAGAGGTTCACCTCCAAAACAACCACCCAGTAACCAGTTGCATTTCACTAACAACGCACCCTTTTGGAACGCTTCTGAGGCTGCAAACTTCAAAGATATTCGGGCCAGCTTCTTCCCTTCATTGCAACCCCCGTTCTCTACGCCAAATTTTGAAGTACAGTCCAAGAATATATCTGAAGTTAGGGAGCGTGGTAGTGTGGGAAAGAAAAGTGGGAATGAGCCAGCACCCAAAAGGACCCGTAACGAAACACCATCTCCTATGCCAGCTTTTAAGATGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTGTCGCCTTTCGGAAAGACTGATACAGCCTCAGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCACGAACAGGTCACTGCCTTAAGTACCCCGTATATGAAAACTGGAGCTCCAATACAGATTGAACAGAATTCTGGTAAATGTAAGGAAACTGAGGGTCCAAAGCAGGATCTTAGAAGCCGAGGGCTATGCTTGGTGCCTATTTCGAGCACATTTCCAGTGACTCATGAAACCACAGTGGATTTTTGGACGCCAACATTCGGAGGGGCTTCCAGATAA 1377 0.4546 MADDQFQASGNWWDTARNVRYESRTSHSSSSAITNIDNFGWQASDMAEMKPRSSMDSSSVVFHDSQNKLQPPDSTTSTDPNLHIMDLGLSSQAMDWNQASLLRGEKGTENSFRSMLQENLSSSRTNFQQETGVELSQQVQWRSEKMFSADSSSNEFKQVNRGFSLDQSKFSPQYSSGDSTVTSQGLPSSNFQMDSSALYGTPSILQGLLGPDHNNQPQQQQPSSFENRSISFPYPTTYGLNSNNDLVPSWSKVPQFLRGSPPKQPPSNQLHFTNNAPFWNASEAANFKDIRASFFPSLQPPFSTPNFEVQSKNISEVRERGSVGKKSGNEPAPKRTRNETPSPMPAFKMRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTALSTPYMKTGAPIQIEQNSGKCKETEGPKQDLRSRGLCLVPISSTFPVTHETTVDFWTPTFGGASR* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01299 458 CDD bHLH_AtbHLH_like 344 395 IPR045239 -
Phac5g01299 458 MobiDBLite consensus disorder prediction 316 333 - -
Phac5g01299 458 MobiDBLite consensus disorder prediction 168 230 - -
Phac5g01299 458 MobiDBLite consensus disorder prediction 316 345 - -
Phac5g01299 458 Gene3D - 348 406 IPR036638 GO:0046983
Phac5g01299 458 MobiDBLite consensus disorder prediction 48 80 - -
Phac5g01299 458 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 348 404 IPR036638 GO:0046983
Phac5g01299 458 MobiDBLite consensus disorder prediction 51 80 - -
Phac5g01299 458 FunFam Transcription factor bHLH123 family 348 410 - -
Phac5g01299 458 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 338 387 IPR011598 GO:0046983
Phac5g01299 458 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 123 439 - -
Phac5g01299 458 SMART finulus 348 393 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01299 Phac-Chr5 30350208 30356439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01299 103 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 46.329 9.55e-78 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01299 - - gmx:100778697 770.385