Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01296 ATGAAGAACCTTATGTCTTTTATGAGAATCATTTTTCTATGCTATCATATACTTGTCTATCTTTGTGAAATTTCCTTGGCACTTGATTCCATTTCTCAAGACCTGTCCCTAAGTGATGATGTTAATAACACCACCTTGGTCTCCAAAGATGGAACCTTTGAACTTGGATTCTTCACCCCAGGAAATTCCCAGAAACGTTACCTGGGGATTTGGTATGGGAAAATTCCTATTCAAACTGTGGTTTGGGTTGCAAACAGGCTCAGTCCTATCAATGATTCATCTGGCATGTTGAGAATGAACACCAGCACTGGGAACCTTGTCCTCACACAGAATGGCAAAGTTGTTTGGTCTACAACCTCTTTAAGAAAAGCAGAAAGTCCAGCAGCCCTTCTCTTAGATTCTGGCAATCTAGTGGTAAGAGATGAGAAAGATGAAAACATTGAGGCCTACTTGTGGCAGAGTTTTGACTACCCCACTGACACTTTCTTACCAGAAATGAAGTTTGGTTGGGACTTGAGAACTGGTATCAATAGGAAGCTAACAGCTTGGAAGAGTCCTGATGATCCATCTCCTAGTGACTTCTCTTTTGGTATGGTGCTCCACACCTATCCTGAAGCATACATGATGAAGGGCAACCAAAAGTTCTACCGAAGTGGACCATGGAATGGCTTGCATTCAAGTGGTTCACCACATGTTAAGGCCAACCCCATTTATGACTTCAGGTTTGTTTTCAACGAAGCTGAAGTTTACTACACATATAGCCTTAAGAATTCCTCTGTGATCTCAAGGTTGGTGCTGAATGGAACAAGCTACGTTCGTAGGCGGTACGTATGGATTGAATCAAAGCAAATATGGGAGGTGTACACTTCAGTGCCATTGGACTTATGTGACAGTTATTCCCTTTGTGGAGCTAATGCAAATTGTGTTATATCAGATTCACCTGTGTGCCAATGTTTGAAAGGGTTCAAGCCTAAGTCCCCTCAAGCATGGAGCTCAATGGATTGGTCTCATGGATGTGTCCGTAATAAGGAATTAAGCTGTGAGAACAAGCACATGGATGGATTTATCAAATTGCCTGAGATGAAAACGCCTGACACTACACATACTTGGCTGGATCAGACAATTGGGCTAGAGGAATGCAGAGCCAAGTGCTTGGATAACTGTTCTTGTATGGCTTATGCAAATTCAGATATCAGTGGAGAAGGAACTGGTTGTGCCATGTGGTTTGGTGATCTAATTGATGTTAGACAGTTTTCAGATGGAGGCCAGGATTTATATGTTCGAATGGATGCTTCAGAATTAGAACACACTAGTGAGAGCCACAAGAAGGGAGGAGTGTTGGTGGCAGTAACAGCTTCTTTGGCCGTGGCCGCAGTTTCTGGTATTCTAATAGTACTTGGCTTGTGCTATAAAAAGAAATCACGCGCCAATACATTTGTTGCAATGCTTGTCAGTAGTCACAATCTAAAACCACCCACTTATACTTTGTCAGAGAGATCAGACTTCAGTATCAGATCATATCAAAACAGTGGAATCCAAGAGGCTGATATGGACCTACCGGTTTTTGACTTGTCAACTATAGCCAAAGCCACTAACAACTTTACAATCAAGAACAAAATTGGAGAAGGTGGTTTTGGATCTGTATACAGGGGAACACTAGCAGATGGGCTGGAAATTGCTGTGAAGAGGCTTTCAGAAAGCTCAGGACAAGGATTGACCGAATTCAAGAACGAAGTAAAATTGATTGCAAAACTTCAACACCGCAATCTTGTAAAGCTTCTTGGATGTTGCCTTGAAGGAGAGGAAAAAATGTTGGTTTATGAGTACATGATAAATGGTAGCCTGAACTCATTTATTTTTGATCAGGAAAAAAGTGAGTTACTAGACTGGTCAAAGCGCTTCAACATTATGTGTGGAATTACTAAGGGCCTTCTCTACCTTCATCAGGATTCCAGGCTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATAATGAGTTGAACCCCAAAATTTCAGATTTTGGCATGGCTAGAATATTTGGTGGAGATCAGAAAGAAGGAAACACTAGGAGAATAGTTGGTACTTATGGCTACATGGCACCAGAATATGCAACTGATGGGCTATTTTCAGTGAAATCTGATGTTTTTAGCTTTGGAGTTTTATTGATGGAGATTATATCTGGAAAGAGAAGCAGAGGATATTATAATCAGAACCACAGCCAAAATCTCATAGGCCATGCATGGGAACTCTGGAAAAAAGGAAGACCACTAGAACTGGTTGATAAAAGCATAGAAAACTCCCTTTTTCAATCACAGATATTGCATTGCATTCATGTTAGTCTCTTGTGTGTTCAACAGAATCCAGATGATAGGCCTGGAATGTCTTGTGTGCTCTTAATGTTAGTGAGTGAAGTTGAATTGCCTGAGCCAAAACAGCCAGGATTCTTTGGAAAATATTCAGGTGAAGGAGACTCCTCCACAAGTAAGCAGCAACAAAGTTCCACAAATGAAATAACCATTACCTTGTTAGAAGCCCGTTGA 2553 0.4093 MKNLMSFMRIIFLCYHILVYLCEISLALDSISQDLSLSDDVNNTTLVSKDGTFELGFFTPGNSQKRYLGIWYGKIPIQTVVWVANRLSPINDSSGMLRMNTSTGNLVLTQNGKVVWSTTSLRKAESPAALLLDSGNLVVRDEKDENIEAYLWQSFDYPTDTFLPEMKFGWDLRTGINRKLTAWKSPDDPSPSDFSFGMVLHTYPEAYMMKGNQKFYRSGPWNGLHSSGSPHVKANPIYDFRFVFNEAEVYYTYSLKNSSVISRLVLNGTSYVRRRYVWIESKQIWEVYTSVPLDLCDSYSLCGANANCVISDSPVCQCLKGFKPKSPQAWSSMDWSHGCVRNKELSCENKHMDGFIKLPEMKTPDTTHTWLDQTIGLEECRAKCLDNCSCMAYANSDISGEGTGCAMWFGDLIDVRQFSDGGQDLYVRMDASELEHTSESHKKGGVLVAVTASLAVAAVSGILIVLGLCYKKKSRANTFVAMLVSSHNLKPPTYTLSERSDFSIRSYQNSGIQEADMDLPVFDLSTIAKATNNFTIKNKIGEGGFGSVYRGTLADGLEIAVKRLSESSGQGLTEFKNEVKLIAKLQHRNLVKLLGCCLEGEEKMLVYEYMINGSLNSFIFDQEKSELLDWSKRFNIMCGITKGLLYLHQDSRLRIIHRDLKASNVLLDNELNPKISDFGMARIFGGDQKEGNTRRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLLMEIISGKRSRGYYNQNHSQNLIGHAWELWKKGRPLELVDKSIENSLFQSQILHCIHVSLLCVQQNPDDRPGMSCVLLMLVSEVELPEPKQPGFFGKYSGEGDSSTSKQQQSSTNEITITLLEAR* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01296 850 SUPERFAMILY Protein kinase-like (PK-like) 514 805 IPR011009 -
Phac5g01296 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 155 - -
Phac5g01296 850 Gene3D - 27 155 IPR036426 -
Phac5g01296 850 CDD B_lectin 42 158 IPR001480 -
Phac5g01296 850 Pfam PAN-like domain 347 415 IPR003609 -
Phac5g01296 850 SMART ntp_6 350 429 IPR003609 -
Phac5g01296 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Phac5g01296 850 ProSitePatterns Protein kinases ATP-binding region signature. 540 562 IPR017441 GO:0005524
Phac5g01296 850 Gene3D Transferase(Phosphotransferase) domain 1 610 813 - -
Phac5g01296 850 Pfam S-locus glycoprotein domain 216 326 IPR000858 GO:0048544
Phac5g01296 850 CDD STKc_IRAK 540 805 - -
Phac5g01296 850 Pfam Protein tyrosine and serine/threonine kinase 535 800 IPR001245 GO:0004672|GO:0006468
Phac5g01296 850 SMART serkin_6 534 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01296 850 PIRSF SRK 1 850 IPR024171 GO:0004674
Phac5g01296 850 MobiDBLite consensus disorder prediction 825 850 - -
Phac5g01296 850 ProSiteProfiles Protein kinase domain profile. 534 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01296 850 ProSiteProfiles EGF-like domain profile. 292 328 IPR000742 -
Phac5g01296 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 189 IPR036426 -
Phac5g01296 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 610 813 - -
Phac5g01296 850 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 795 - -
Phac5g01296 850 Pfam Domain of unknown function (DUF3403) 808 850 IPR021820 GO:0004674
Phac5g01296 850 ProSiteProfiles Bulb-type lectin domain profile. 32 152 IPR001480 -
Phac5g01296 850 CDD PAN_AP_plant 345 428 - -
Phac5g01296 850 MobiDBLite consensus disorder prediction 817 850 - -
Phac5g01296 850 ProSiteProfiles PAN/Apple domain profile. 347 430 IPR003609 -
Phac5g01296 850 Gene3D Phosphorylase Kinase; domain 1 496 609 - -
Phac5g01296 850 SMART blect_4 37 158 IPR001480 -
Phac5g01296 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 499 609 - -
Phac5g01296 850 Pfam D-mannose binding lectin 79 184 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01296 Phac-Chr5 30304902 30312553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01296 505 850 Receptor kinase-like Gene Family AT4G11530 54.469 5.20e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac5g01296 PK_Tyr_Ser-Thr 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01296 - - pvu:PHAVU_005G088800g 1438.32