Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01293 ATGGAAGGATTTACCTTGCTTCTGTTCTGCCTTGCCTTGCTGAATACTATAGCAGCTGCCACTGTGAGAGAAACTATCAATGTATTGCAATCTATCCGTGAAGGCCAGATCATTGTTTCACCTGGCAAAACCTATGCACTTGGATTCTTCAGTCCAGGCAATTCCAAGAACCGTTATGTGGGAATTTGGTACAATGAGATCCCAACACAGACTGTAGTATGGGTTGCCAACAGAGACAACCCTCTTACTGACTCATCAGGGGTTTTGAAGCTCAATGAAACTGGAGTTCTTGTTCTTCTCAACCACAACAAGAGTGTCATCTGGTCTTCCAGCACAACAGGTTCAGCACGGCATCCGGTAGCAAAACTTTTGGATACTGGAAATCTCATTGTGCGGAATGGAAAGGGCAATGATGAGGAAAAGGATTTACTGTGGCAAAGTTTTGATTATCCAGGGGACACAATCTTGCCGGGACAGAAGTTTGGAAGAAATCTAGTTAAAGGTCTGAATCGATACATGTCATCATGGAATAGCTCTGAGGATCCATCTCATGGTGTATACAGTTATCAACTTGATATCACTGGATATCCGCAGTTTGTTTTGAGAAAAGGAACTTCCAAAAGATATCGTTTTGGATCATGGAATGGTATTCAGTTCAGTGGGGCACCTCTGTTGAAACAAAGTGATTTTACAAGATTTAGTTTTACTTCTAACAAGGAGGAGTTGTATTTTATGTTTGAGCGTACCAACAAGTCACTTTTACATAGGATGGTGTTAAACCAAGATGGTCGTATCCTGGGGACTTATTGGGATGATGAACGAAAAATTTGGAACTTGCATGCACGAATTCCGGTTGATGACTGTGATTACTACGGCAAATGTGGAGCCTATGCTAGCTGCAACATAGACAATATCCCTCCATGTAAATGCTTGGATGGATTTGTGCCCAAAACGGCTGACCTTTATGGTAGTTGTGTCAGGAGAACTTCACTGAGTTGTCATGAAGACGAGTTTTTACGGGTTTCAGGGTTGAAATTACCAGACACAGAGAAATCCTGGTTTGCCAGAAATATGAGCCTTGAGGATTGTAAAATATTGTGCATGAACAATTGCTCCTGTACAGCTTATGCAGCATTGGATGTGAGTAAAGGGCCCAATGGGTGTTTACTCTGGTTTAGTGATCTGCTTGACATAAGAAAATTGACCGATGTTGATGAAGATATATACTTAAGGATGGCTAGGACAGAAGTAGAAGCTATTGAAGGAAAGCAATTGCATAAATCCAACATCCGGAAGCAAGAGACTCTTTTCATAAGTTCTGTGTTGTTTTTTGGAATTTTAGTACTATGTTTAACCTTCATCCTTTGTAGACGGTTGAAGACACGGCAGAAAGGAAAGATGGAAGGTAATCTAGAAAGAGACGTGACTGAAATAAATGAGCACGAGAGTAAAGATCTAGAGTTACCCATGTTTGAGTTGTCTACAATTACTTCTGCAACCAATAACTTTTCACCTGACAACAAACTAGGGGAAGGTGGCTTTGGATCAGTTTATAAGGGCATCCTAGCCGATGGAGGAGAAATAGCTGTGAAGAGGCTCTCTATGAATTCCAAACAAGGACTTCCAGAGTTCAAAAATGAAGTTATGCATATTGCAAAGCTTCAGCACAGGAATTTAGTGAGGCTACTAGGGTACTGCCTTCAAGCAGGAGAAAGATTGCTTGTTTATGAATTTATGCCCAACAAAAGCTTGGATTACTTCATATTTGATGAAAACAAGAGCATGTTACTAGATTGGCCAAGGCGCATGGTGATTATCAATGGGGTTGCTCGGGGTCTTCTTTATCTTCATCAAGATTCAAGGCATAGAATAGTTCATAGAGATCTCAAAGCCGGGAATGTTTTGTTAGATAGTGAAATGAACCCAAAAATCTCGGACTTTGGACTGGCTAGAAGCTTTGGAGGAAATGAAATCGAAGCAACCACAAAACATGTAGTTGGAACCTATGGCTATCTGCCTCCAGAGTACATAATTGATGGAGCTTATTCAACAAAGTCAGATGTTTTCAGCTTTGGTGTGTTGATATTGGAGATAGTGAGTGGGAAGAGAAATAAAGGATTCTGTCATCAAGATAATCTACTGGCACATGTGTGGAGAGTGTTTACTGAAGGCAAATGTTCTGAAATAGTTGATGCAGCAATAACAGAGTCACTCCATTTATCTGAAGCTCTAAGATCAATCCATGTGGGACTACTGTGTGTGCAACTATGTCCAGACGATAGGCCAAACATGTCATCAGTGGTTTTGATGCTGAGCAGCGAATCTGAAATGCCTCAGCCAAACTTGCCTGGATTCTTTACAAGTGCAAGTATGGTTGAAGATAGTTCTTCATCAAACAGTCATAAACAACACACAAATAATGACATGTCACTCAGCATAATGTCTGCTAGATAG 2454 0.4079 MEGFTLLLFCLALLNTIAAATVRETINVLQSIREGQIIVSPGKTYALGFFSPGNSKNRYVGIWYNEIPTQTVVWVANRDNPLTDSSGVLKLNETGVLVLLNHNKSVIWSSSTTGSARHPVAKLLDTGNLIVRNGKGNDEEKDLLWQSFDYPGDTILPGQKFGRNLVKGLNRYMSSWNSSEDPSHGVYSYQLDITGYPQFVLRKGTSKRYRFGSWNGIQFSGAPLLKQSDFTRFSFTSNKEELYFMFERTNKSLLHRMVLNQDGRILGTYWDDERKIWNLHARIPVDDCDYYGKCGAYASCNIDNIPPCKCLDGFVPKTADLYGSCVRRTSLSCHEDEFLRVSGLKLPDTEKSWFARNMSLEDCKILCMNNCSCTAYAALDVSKGPNGCLLWFSDLLDIRKLTDVDEDIYLRMARTEVEAIEGKQLHKSNIRKQETLFISSVLFFGILVLCLTFILCRRLKTRQKGKMEGNLERDVTEINEHESKDLELPMFELSTITSATNNFSPDNKLGEGGFGSVYKGILADGGEIAVKRLSMNSKQGLPEFKNEVMHIAKLQHRNLVRLLGYCLQAGERLLVYEFMPNKSLDYFIFDENKSMLLDWPRRMVIINGVARGLLYLHQDSRHRIVHRDLKAGNVLLDSEMNPKISDFGLARSFGGNEIEATTKHVVGTYGYLPPEYIIDGAYSTKSDVFSFGVLILEIVSGKRNKGFCHQDNLLAHVWRVFTEGKCSEIVDAAITESLHLSEALRSIHVGLLCVQLCPDDRPNMSSVVLMLSSESEMPQPNLPGFFTSASMVEDSSSSNSHKQHTNNDMSLSIMSAR* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01293 817 Pfam Protein kinase domain 506 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01293 817 Gene3D Transferase(Phosphotransferase) domain 1 579 781 - -
Phac5g01293 817 CDD PAN_AP_plant 329 413 - -
Phac5g01293 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 578 - -
Phac5g01293 817 MobiDBLite consensus disorder prediction 793 817 - -
Phac5g01293 817 Gene3D Phosphorylase Kinase; domain 1 463 578 - -
Phac5g01293 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 148 - -
Phac5g01293 817 SMART serkin_6 503 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01293 817 CDD STKc_IRAK 509 771 - -
Phac5g01293 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 182 IPR036426 -
Phac5g01293 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 779 - -
Phac5g01293 817 PIRSF SRK 2 817 IPR024171 GO:0004674
Phac5g01293 817 CDD B_lectin 30 151 IPR001480 -
Phac5g01293 817 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 762 - -
Phac5g01293 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Phac5g01293 817 ProSiteProfiles PAN/Apple domain profile. 333 413 IPR003609 -
Phac5g01293 817 SUPERFAMILY Protein kinase-like (PK-like) 481 771 IPR011009 -
Phac5g01293 817 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Phac5g01293 817 Gene3D - 18 148 IPR036426 -
Phac5g01293 817 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Phac5g01293 817 Pfam D-mannose binding lectin 71 176 IPR001480 -
Phac5g01293 817 SMART ntp_6 333 412 IPR003609 -
Phac5g01293 817 Pfam Domain of unknown function (DUF3403) 772 817 IPR021820 GO:0004674
Phac5g01293 817 Pfam PAN-like domain 333 398 IPR003609 -
Phac5g01293 817 Gene3D Hepatocyte Growth Factor 331 410 - -
Phac5g01293 817 SMART blect_4 29 151 IPR001480 -
Phac5g01293 817 ProSiteProfiles Protein kinase domain profile. 503 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01293 817 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01293 Phac-Chr5 30269693 30273844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01293 491 786 Receptor kinase-like Gene Family AT4G23290 59.136 1.16e-118 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac5g01293 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01293 - - vun:114184694 1473.76