Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01290 ATGGAAAGCTTAAAGGCTTTGGTTTTGTGGTCTCTTCTGTTGCATTTCATACCAGGCTTCAGGACCCTTGAAACCATTGCTCCAGGCCAATCAGTGAAGGATAATGAGACTCTAGTTTCAGCAGAAGGGACTTTTGAAGCAGGGTTCTTCAACTTTGGAGCTCAAAGTAGCAACTACTTTGGTATATGGTACAAGGATATTTCTCCAAGAACAGTTGTATGGATAGCCAATAGAGATACTCCAGTTGGAAACTCCTCAGGAGTTTTGAATGTAACTGATGGGGGAAATCTTATTATTTTGAATGGTTCAGGGGCCATAGTCTGGTCATCCAATACGTCAGCAGCTGCAAAGAAGCCTATTGTGCAGCTTTTGGAGACTGGAAACCTTGTTGTGAAAGAAGAAAGCAACCAAGAGAATCTTCTATGGCAGAGTTTTGATCTTCCTGGGGACACTTTGTTGCCAGGGATGCGACTTCGAAGTAGCATGGTAAATGGTAGTTTTACATCTCTGACATCTTGGAGAGACACAGAAGATCCTGGTAGAGGTGTGTATTCATATCACATAGATACTCGTGGTTTTCCTCAAGTGGTGATTACCAAGGGAGGCATATTGTTATACAGACCAGGTTCATGGAATGGCAATATTTTATCTGGGATCCCTTCTGAAACGTTGTACAAAATCTTTAATTTCTCTTTTGTTATAACTGAGAAGGAAGTTTCTTATGGATATGAACTACTGAACAAGTCAATTGTTTCTAGATACATGATCACGTTAACTGGTCAAATACAACGTTTCGTTTTGTCTGATTTGACAAATAGTTGGCAGCTTTTCTACTCTGGCCCCGGAGACCAGTGTGATAATTATGCCGTTTGTGGTGTGAATTCTAATTGTGATGTAAATAGATCTCCAACATGTGAGTGCCTTCAGGGTTTCATTCCCAGATCTCAAGAAAAATGGAATGCACAAAACTGGTCTGATGGGTGTGTTGGGAGAGTTAATTTAGATTGTGCCAATAGTGATGGCTTTCTGAAGTATCAGGGAATGAAGTTGCCGGATACATCAACCTCATGGTTTGACAGAAACATGAACCTTGAGGAATGTAAGAATTTCTGTCTGAAAAACTGCTCCTGTACAGCTTTTGCAAATTTAGATATCAGAGATGGTGGAAGTGGATGCTTGCTTTGGTTTAATAACATTGTGGATGTGAGAAAACTAACCACTGGAGGACAAGATCTTTTCATAAGAGTGGCAGCTTCAGATCTAGGTCATAAAAAAGGCTTAAGCAAGAAGCAGCTCGCAGGAATTCTTGCAGGTTGCACTGTATTTATTGTTGTCATGATATTATTGGGAGTTACACTTCGGAGGAAAGAGCTTGAGAAGCCAGGTAGCTGGAAGAATCACACTGATAAGACACAGAAGGAAAACATTGACATTCCAATATTTGATTTTTCAACCATAGCTAATGCAACCAATGACTTTTGCATTACTCATAAATTGGGAGAAGGTGGATTTGGACCAGTTTACAAGGGTACTTTGGCAAATGGCCAAGATATAGCTGTGAAGCGGCTTTGCAATACTTCAGGACAAGGACCAAAGGAATTCATAAACGAAGTTGTGCTAATTGCTAATCTTCAGCACCGAAACCTTGTGAAGCTTCTTGGGTGTTGCATTCAAGATGATGAGAGGATCTTGATATATGAATTCATGACTAACAGAAGCTTGAACTACTTTATTTTTGATGAAGCTAGAAAAAGTTTGCTGGATTGGGCTCAGCGCTTCCAAATTATTTGTGGAATTGCCCGAGGACTTCTCTATCTTCATGAAGATTCTAGATTAAGAATTATCCACAGAGATCTCAAGACCAGCAATATTCTTCTAGACGAAGACATGCATCCGAAAATATCAGACTTTGGTCTCGCTACAACATTTGGAGGAGATGAAGTTGAAGGCAAAACAAAGAGAATAGTGGGAACTTATGGTTATATTTCTCCAGAATATGCAGCCCGTGGGAATTTCTCAGTGAAATCTGATGTCTTCAGTTTTGGTGTTATATTACTAGAGATAGTTTGTGGAAAAAAGAATAGGGAATATTTTGACCATCTTGATCATGATCTTCTTGGACATGCATGGAGACTTTGGTGTGAAGAAAAACCAATGGATTTGATAGATGAATCACTACGCGATTCAATAGCTCTTGCTGAAGCTAATGTATTGAGATGTATTCACATTGGGCTTCTATGTGTACAAGACAGAGCAGAGGATAGACCAGACATGTCATTAATAGTTCTAATGCTGAATGGAGAGAAACCACTGCCTAAGCCAAGGGAACCTGCTTTTTATCCCCATCAATCTGGCTCTTCATCAGGAAATAGTAAACTGCAATCAACCAATGGTATTTCTATCTCATTGTTGGAGGCAAGATAG 2424 0.3981 MESLKALVLWSLLLHFIPGFRTLETIAPGQSVKDNETLVSAEGTFEAGFFNFGAQSSNYFGIWYKDISPRTVVWIANRDTPVGNSSGVLNVTDGGNLIILNGSGAIVWSSNTSAAAKKPIVQLLETGNLVVKEESNQENLLWQSFDLPGDTLLPGMRLRSSMVNGSFTSLTSWRDTEDPGRGVYSYHIDTRGFPQVVITKGGILLYRPGSWNGNILSGIPSETLYKIFNFSFVITEKEVSYGYELLNKSIVSRYMITLTGQIQRFVLSDLTNSWQLFYSGPGDQCDNYAVCGVNSNCDVNRSPTCECLQGFIPRSQEKWNAQNWSDGCVGRVNLDCANSDGFLKYQGMKLPDTSTSWFDRNMNLEECKNFCLKNCSCTAFANLDIRDGGSGCLLWFNNIVDVRKLTTGGQDLFIRVAASDLGHKKGLSKKQLAGILAGCTVFIVVMILLGVTLRRKELEKPGSWKNHTDKTQKENIDIPIFDFSTIANATNDFCITHKLGEGGFGPVYKGTLANGQDIAVKRLCNTSGQGPKEFINEVVLIANLQHRNLVKLLGCCIQDDERILIYEFMTNRSLNYFIFDEARKSLLDWAQRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLDEDMHPKISDFGLATTFGGDEVEGKTKRIVGTYGYISPEYAARGNFSVKSDVFSFGVILLEIVCGKKNREYFDHLDHDLLGHAWRLWCEEKPMDLIDESLRDSIALAEANVLRCIHIGLLCVQDRAEDRPDMSLIVLMLNGEKPLPKPREPAFYPHQSGSSSGNSKLQSTNGISISLLEAR* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01290 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 458 568 - -
Phac5g01290 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 145 - -
Phac5g01290 807 Gene3D - 21 145 IPR036426 -
Phac5g01290 807 Pfam Protein tyrosine and serine/threonine kinase 495 761 IPR001245 GO:0004672|GO:0006468
Phac5g01290 807 Pfam S-locus glycoprotein domain 206 314 IPR000858 GO:0048544
Phac5g01290 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Phac5g01290 807 CDD PAN_AP_plant 332 417 - -
Phac5g01290 807 Gene3D Transferase(Phosphotransferase) domain 1 569 771 - -
Phac5g01290 807 PIRSF SRK 1 807 IPR024171 GO:0004674
Phac5g01290 807 Pfam D-mannose binding lectin 71 174 IPR001480 -
Phac5g01290 807 Pfam PAN-like domain 336 402 IPR003609 -
Phac5g01290 807 SMART serkin_6 493 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01290 807 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 755 - -
Phac5g01290 807 CDD B_lectin 30 148 IPR001480 -
Phac5g01290 807 CDD STKc_IRAK 499 767 - -
Phac5g01290 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 569 773 - -
Phac5g01290 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 335 416 - -
Phac5g01290 807 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Phac5g01290 807 Gene3D Hepatocyte Growth Factor 333 414 - -
Phac5g01290 807 Gene3D Phosphorylase Kinase; domain 1 466 568 - -
Phac5g01290 807 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Phac5g01290 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 179 IPR036426 -
Phac5g01290 807 SUPERFAMILY Protein kinase-like (PK-like) 475 765 IPR011009 -
Phac5g01290 807 MobiDBLite consensus disorder prediction 774 794 - -
Phac5g01290 807 SMART ntp_6 337 416 IPR003609 -
Phac5g01290 807 ProSiteProfiles Protein kinase domain profile. 493 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01290 807 SMART blect_4 29 148 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01290 Phac-Chr5 30249878 30254008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01290 425 782 Receptor kinase-like Gene Family AT4G23190 51.233 4.30e-123 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac5g01290 PK_Tyr_Ser-Thr 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01290 - - ccaj:109805721 1365.9