Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01282 ATGGATTTCGATCCCGAGTTCCCCGTGCCTTCTTACAGAGAACGTGAAGCTATAAGCCATTACCTCAAAATCGAGCAAGAATTCATGGCTCATAGGGCGTTTTACACACAATCACGCAACGCTCATTATCGGCTGATTGCGGTTTCGACGGTCGTTCAGCTATCCGAGGGCAGAGTTATTGATACGTACATTCCGTATATTGCAATGAATTACTTCGATCGCTTTGTTTCAACGAATCCGCTCTCAGTGAGAAGAGAAGCGATTTACAACCCCCTAAGGGTAATGAGAATGGAATTTCGCATTCTCAGTGGACTTAACTGGCGAATGCGATCTGTAACTCCCTTTCACTTCCTGGACTACTATTATCCCACCTTCAAAAGAATCGGTGGTTTTAAACGCCAATCCATAAATGAAATCATAGTCCAGTCTCAAGGAGAGGTCTACTTCACTCAATTCAGACCTTCTGAGATTGCAATGTCCGCTTTACTAGCTGCTTCTTACCTTGGATATTCCTCACGGTTTACCTTCATCGAGGAATCAATTCGCATTTCGAGGAGCATCAAGATACGAAACAGTTCAGGAGATGTTATCTTTTCTATGACAGTTGAGGTTTCCTCCTCATCGGAAGAATCTTCAGGATCGAAGACACGAACAACGAAAGCAGAAGAAGAGTTAGGAAAAGAAGTTGATTTAGAAGTACAAGAACATGGCACGAGCTCGACTTCCCAGTTTCGGAACACGGTGATGGATGATGATGATGAAGAAGAAGAACCAAATGTAGCACCGTTAGCCCGCCGAAGAAGACGGAACAGTGGCGAGGAAGTTGAAACCGAGGAAAACGCAGCGACATTAGAAGCTATATCTGAAGAGTCTGGGACCGGAGAAAGAGAGGACAAGAGCGTAGTGACATCTGATGAATTTGTAGAAACTGAGACCGGAGCAAGAGATGACAATGGCAAGGTGCCCTCTGAAGAAAGTGTGCAAGTTGAGAGCGGAACAAGAGATGACAAGTGCGAGGGGCCATCTAAAGAAATAGGAGAAGCTGAGAGCAGAGCCAGAGAGGACAAGGGCAAGGCAGTGCAGGAAATAAGTGAAGTACAAGAAGAAAACGAAAATGAGTTACGACGAAGAAAGGGAAAGGGCAAGGCCGTGATGGAAATAGGTGATGTAGAGGAAGTAAACGAGAATGAGTTACGACGAAGACAGAGAAAGGGCAATGCCGTGCTGAAAATACGTGATGTAGAGGAAGAAAACGAGAATGAGTTACGACGAAGACAGAGAAAGGGCAAGGCCGTGCTGGAAACACGTGATGTGGAGGAAGAAAACGAGTATGAGGACTTAACACGAAGAGTGGAGAGGCCAAGGAGAAGAACATTAAGGTCAGAAGTAGGTCAGGCACCATTGACAGCAATGAATTTTCAACTGCGGTGGCCTATTAGTGTGCGGCCAGGTGAGTATGTTCGCGATATAGATAGGAGCCTACAGACAGATGATCCCCACATCAGAACCACTCGACGTTCTACATCAACAAGAGGGACCGACAGCGATCCAGCTCTAGTTTCCAACGGTTGTCAATGCACCATCATGTAG 1590 0.4585 MDFDPEFPVPSYREREAISHYLKIEQEFMAHRAFYTQSRNAHYRLIAVSTVVQLSEGRVIDTYIPYIAMNYFDRFVSTNPLSVRREAIYNPLRVMRMEFRILSGLNWRMRSVTPFHFLDYYYPTFKRIGGFKRQSINEIIVQSQGEVYFTQFRPSEIAMSALLAASYLGYSSRFTFIEESIRISRSIKIRNSSGDVIFSMTVEVSSSSEESSGSKTRTTKAEEELGKEVDLEVQEHGTSSTSQFRNTVMDDDDEEEEPNVAPLARRRRRNSGEEVETEENAATLEAISEESGTGEREDKSVVTSDEFVETETGARDDNGKVPSEESVQVESGTRDDKCEGPSKEIGEAESRAREDKGKAVQEISEVQEENENELRRRKGKGKAVMEIGDVEEVNENELRRRQRKGNAVLKIRDVEEENENELRRRQRKGKAVLETRDVEEENEYEDLTRRVERPRRRTLRSEVGQAPLTAMNFQLRWPISVRPGEYVRDIDRSLQTDDPHIRTTRRSTSTRGTDSDPALVSNGCQCTIM* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01282 529 Gene3D - 78 212 - -
Phac5g01282 529 PANTHER CYCLINS 17 175 IPR039361 -
Phac5g01282 529 MobiDBLite consensus disorder prediction 259 276 - -
Phac5g01282 529 MobiDBLite consensus disorder prediction 207 384 - -
Phac5g01282 529 MobiDBLite consensus disorder prediction 290 384 - -
Phac5g01282 529 SUPERFAMILY Cyclin-like 14 109 IPR036915 -
Phac5g01282 529 MobiDBLite consensus disorder prediction 497 522 - -
Phac5g01282 529 CDD CYCLIN_AtCycD-like_rpt2 112 182 - -
Phac5g01282 529 Coils Coil 356 376 - -
Phac5g01282 529 MobiDBLite consensus disorder prediction 215 234 - -
Phac5g01282 529 Coils Coil 430 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01282 Phac-Chr5 29710520 29713440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01282 19 167 Core Cell Cycle Gene Families AT4G03270 27.419 5.49e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01282 - K18812 pvu:PHAVU_005G087500g 829.706