Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01281 ATGACCAACTCCTCTACTGAGAAGAATGGGCTGAAGAAGGGTCCATGGACCCCAGAGGAAGATCAGAAACTCATCGATTACATTCACAAACATGGACACGGCAAATGGCGAACCCTTCCCAAAAATGCAGGACTAAAAAGATGTGGAAAGAGTTGTCGGCTTCGCTGGGCTAATTACTTGAGACCTGATATAAAGAGAGGGAGATTCTCATTCGAAGAAGAAGAAGCCATCATCCAGTTACACAGTGTTTTGGGAAACAAGTGGTCTACAATTGCTGCTAACTTGCCAGGAAGAACAGATAATGAGATCAAGAATTATTGGAACACCCACATCAAGAAAAAGCTATTCAAGATGGGGATTGATCCTGTTACTCACACACCACGCCTTGATGTTCTACAACTTGCCTCCATTCTCAACACATCTTTATTCAATTCATCACCCCAATTTAATCACCCTTTTCTTTCTGGGATCGGAAGATCAGTGATAAACCCAACCCACCTCCTAAGTTTGCTCTCCACTCTTCTGTCATGTCAAAGCAGAAACAACCCTGATAATGTATTGAATCACAATAATTACCAGCAAGGTAATAACCAACTTAGTGGGAGCACTCTATTGCAAAATCAACCTCAATGTTCCCAAATGCAACTTGAGACCATACCAACCTTCCAACCAAACCAACCCCAGGTTTCACTTCAAGAAAACCTTATTGCTAAGTCTAATCCATTGAACATGGAACACCAACTGATGAAAAGTAAATTACAGAATCAAATCTCCCCACTTGCTACCTCTTTTAGCCACCAAAACACCCTTCAAAATCTTTGGCACTATGACAATGGAGACAACATATCGGACCTATCAATTCCCCAATCATCATCAGCTATGCAGTGTTTCTCTTCATCCAAGTTCAACTCTATATTCAACAATCTCTTGGGAAATCAGAATCTGTCTCACAACGAAGGGATCCCAAATTTCAATCTAACTTCACTGCTATCGTCCACAACTTCATCCAGCCCTTTGAATTCATCATCTTCCACGACATTTTTTAACGGAACCACTGAAGATGAAAGGGACACTTACGGCAGCAACGTCTTAATGTATAACATTTCCAATGGCTTGAATGACTCTGGACTCTTGTGA 1137 0.4134 MTNSSTEKNGLKKGPWTPEEDQKLIDYIHKHGHGKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKRGRFSFEEEEAIIQLHSVLGNKWSTIAANLPGRTDNEIKNYWNTHIKKKLFKMGIDPVTHTPRLDVLQLASILNTSLFNSSPQFNHPFLSGIGRSVINPTHLLSLLSTLLSCQSRNNPDNVLNHNNYQQGNNQLSGSTLLQNQPQCSQMQLETIPTFQPNQPQVSLQENLIAKSNPLNMEHQLMKSKLQNQISPLATSFSHQNTLQNLWHYDNGDNISDLSIPQSSSAMQCFSSSKFNSIFNNLLGNQNLSHNEGIPNFNLTSLLSSTTSSSPLNSSSSTTFFNGTTEDERDTYGSNVLMYNISNGLNDSGLL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01281 378 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Phac5g01281 378 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Phac5g01281 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Phac5g01281 378 CDD SANT 68 111 IPR001005 -
Phac5g01281 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Phac5g01281 378 Gene3D - 68 115 - -
Phac5g01281 378 SMART sant 12 62 IPR001005 -
Phac5g01281 378 SMART sant 65 113 IPR001005 -
Phac5g01281 378 CDD SANT 15 60 IPR001005 -
Phac5g01281 378 Gene3D - 10 66 - -
Phac5g01281 378 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Phac5g01281 378 FunFam MYB-related transcription factor 12 65 - -
Phac5g01281 378 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Phac5g01281 378 FunFam Transcription factor MYB39 68 129 - -
Phac5g01281 378 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Phac5g01281 378 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 5 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01281 Phac-Chr5 29636701 29638556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01281 7 378 MYB Transcription Factor Family AT4G21440 44.010 6.48e-87 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac5g01281 Myb_DNA-binding 8.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01281 K09422 - gmx:100820398 577.4