Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01269 ATGGCAGCAACATTGATGGCAGCAACAAGTAGTTCTGGCACTGTTCTTAAGTCAACTCCTTTCCTTGGCCAAGGCAAGGGTGCCAATGCCAACCCTCTTAGGGATGTTGTCTCAATGGGAACCGGGAAGTACACCATGAAGAGCAATGAGTTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTCTCAGCTCAAACCCCTTCATACTTGAAGGGTGAATTCCCAGGTGATTATGGATGGGACACTGCTGGCTTATCTGCTGACCCAGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCCATGCTTGGAGCACTGGGCTGCATCACCCCGGAGGTGCTAGAGAAGTGGTTGAGAGTGGACTTCAAGGAGCCCGTATGGTTCAAAGCTGGGGCCCAGATATTCTCAGAAGGTGGGCTTGACTATTTGGGGAACCCAAACCTTGTCCATGCCCAAAGCATCTTGGCAGTGCTGGGCTTCCAAGTAGTTCTGATGGGCCTGGTTGAAGGGTTCCGCATCAATGGGCTTGATGGAGTAGGAGAGGGCAACAACCTTTACCCTGGGGGCCAGTACTTTGACCCACTGGGCCTGGCTGATGACCCAGTAAATTTTGCTGAGCTAAAAGTGAAGGAGATAAAGAATGGAAGGTTGGCCATGTTCTCTATGTTTGGGTTCTTTGTTCAAGCCATTGTAACTGGCAAAGGCCCATTGGAGAACCTGTTGGACCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTTTGCCACCAAGTTTGCCCCTGGATCTTAA 813 0.5092 MAATLMAATSSSGTVLKSTPFLGQGKGANANPLRDVVSMGTGKYTMKSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYFDPLGLADDPVNFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVFATKFAPGS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01269 270 Gene3D Chlorophyll a/b binding protein domain 59 263 - -
Phac5g01269 270 SUPERFAMILY Chlorophyll a-b binding protein 51 267 - -
Phac5g01269 270 FunFam Chlorophyll a-b binding protein, chloroplastic 59 263 - -
Phac5g01269 270 Pfam Chlorophyll A-B binding protein 69 236 IPR022796 -
Phac5g01269 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 10 269 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01269 Phac-Chr5 29265571 29267661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01269 1 269 Chloroplast and Mitochondria Gene Families AT1G29930 65.809 4.84e-120 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01269 K08914 - gmx:100779387 523.472