Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01268 ATGGCAGCAACATTGATGGCAGCAACAAGTAGTTCTGGCACTGTTCTTAAGTCAACTCCTTTCCTTGGCCAAGGCAAGGGTGCCAATGCCAACCCTCTTAGGGATGTTGTCTCAATGGGAACCGGGAAGTACACCATGAGCAATGAGTTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTCTCAGCTCAAACCCCTTCATACTTGAAGGGTGAATTCCCAGGTGATTATGGATGGGACACTGCTGGCTTATCTGCTGACCCAGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCCATGCTTGGAGCACTGGGCTGCATCACCCCGGAGGTGCTAGAGAAGTGGTTGAGAGTGGACTTCAAGGAGCCCGTATGGTTCAAAGCTGGGGCCCAGATATTCTCAGAAGGTGGGCTTGACTATTTGGGGAACCCAAACCTTGTCCATGCCCAAAGCATCTTGGCAGTGCTGGGCTTCCAAGTAGTTCTGATGGGCCTGGTTGAAGGGTTCCGCATCAATGGGCTTGATGGAGTAGGAGAGGGCAACAACCTTTACCCTGGGGGCCAGTACTTTGACCCACTGGGCCTGGCTGATGACCCAGTAAATTTTGCTGAGCTAAAAGTGAAGGAGATAAAGAATGGAAGGTTGGCCATGTTCTCTATGTTTGGGTTCTTTGTTCAAGCCATTGTAACTGGCAAAGGCCCATTGGAGAACCTGTTGGACCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTTTGCCACCAAGTTTGCCCCTGGATCTTAA 810 0.5099 MAATLMAATSSSGTVLKSTPFLGQGKGANANPLRDVVSMGTGKYTMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYFDPLGLADDPVNFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVFATKFAPGS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01268 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
Phac5g01268 269 FunFam Chlorophyll a-b binding protein, chloroplastic 58 262 - -
Phac5g01268 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Phac5g01268 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 10 268 IPR001344 GO:0009765|GO:0016020
Phac5g01268 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01268 Phac-Chr5 29265571 29267661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01268 1 268 Chloroplast and Mitochondria Gene Families AT1G29930 66.052 3.99e-120 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01268 K08914 - gmx:100779387 528.094