Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01261 ATGAACGGTAAGGCTAATGTCACCAAAGAGCTCAACGCAAAGCACAAGAAGATACTGGAAGGACTTCTTAAATTACCAGATAATAGAGAATGTGCTGATTGCAAAGCTAAAGGTCCAAGATGGGCTAGTGTAAATCTTGGCATCTTTATATGCATGCAGTGTTCAGGAATACATCGAAGTTTAGGTGTGCATATATCAAAGGTTCGTTCTGCAACCCTTGACACTTGGCTTCCGGAGCAAGTTGCATTCATTCAATCAATGGGAAATGAGAAAGCAAATAACTACTGGGAAGCAGAATTACCACCAAACTATGATAGAGTTGGAATTGAGAATTTCATTCGTGCAAAGTATGATGAGAAGAGATGGGTTCCAAGAGATGGGAATCCAAAAACACCTTCTGGATTGCGGGAAGAAAGAAGTCCTTCACATTGGCAGAGGCCTGTGGAGAGAAGTGGTCATGCTGCTGTTTCTGAAAATACTTTTCAGGAAAGGAAGAAATACCCACCGTCAAATGCAATTCCTGCTACAAGAAATAGTGTTCCTGTTCCTGCTCCTGCTCCTGCTCCACCCAAAGCACCGGAGCAAGTAACTCATATTACCAAACCTCAGCCTGTTGAGAAAGTGGAACCATTAGCACCACAGCCACGAGCTGAATCTGCAAAGCTAGCTATGGACGCAGCTCAAAATACCCCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACATGTTGTCTATGGATGTCCCCAACGAAAATGGCTCTGAGTCACCCAGTAGAACTACTGATGATAATCTCTGGGCAGGTTTTCAGTCTGCTGCAGAGGTGTCAACAGCTGAGAAGACTAGTCCACTGAAAGCAGTTGATAATAGTACTCCGCCATCTGCAACTGGTATTGAGGATCTTTTCAAAGATTCACCTTCTATAATGCCAAGCTTAACTCCAGGAAAGCCACAGAAAGATGTTAAAAATGATATAATGAGCCTCTTTGAGAAGGGCAATATGGTGTCTCCATTTTCTATGCATCAGCAGCAGCTTGCCATGCTTGCACAGCAACAGTCTCTTCTAATGGCTGCTGCAGGTAAATCAGGTGGGGATCCCAGGTATCCTCCCGCTGGCATGCTAGAACCTAGACCAAATGTTCCTATGCAAAGTTGGCCAGCTACTGGCTACTCGATTTCTGGAGTACTGCCCATGCAGGGTCAGATAAGGAATATGACCCCAACAAATTTTGCTGGGAGCTCTGTACAATATCAACCATCCAGTTTCTATGGTATGGGGCAAGTTCCACCTCCAGTTAACGGTATGATGACGACAATGGGAGCGAGTAAACCTCAGTCAGGAGCTCCAGTGTCATCTAGCAGTACACAGTCAGCGAAGGATTATGATTTTTCCTCCTTAACACACGGGATGTTTGCGAAGCAGTGA 1425 0.4463 MNGKANVTKELNAKHKKILEGLLKLPDNRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANNYWEAELPPNYDRVGIENFIRAKYDEKRWVPRDGNPKTPSGLREERSPSHWQRPVERSGHAAVSENTFQERKKYPPSNAIPATRNSVPVPAPAPAPPKAPEQVTHITKPQPVEKVEPLAPQPRAESAKLAMDAAQNTPPKVDYATDLFNMLSMDVPNENGSESPSRTTDDNLWAGFQSAAEVSTAEKTSPLKAVDNSTPPSATGIEDLFKDSPSIMPSLTPGKPQKDVKNDIMSLFEKGNMVSPFSMHQQQLAMLAQQQSLLMAAAGKSGGDPRYPPAGMLEPRPNVPMQSWPATGYSISGVLPMQGQIRNMTPTNFAGSSVQYQPSSFYGMGQVPPPVNGMMTTMGASKPQSGAPVSSSSTQSAKDYDFSSLTHGMFAKQ* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01261 474 CDD ArfGap 19 117 - -
Phac5g01261 474 MobiDBLite consensus disorder prediction 155 177 - -
Phac5g01261 474 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Phac5g01261 474 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Phac5g01261 474 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Phac5g01261 474 MobiDBLite consensus disorder prediction 122 195 - -
Phac5g01261 474 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Phac5g01261 474 Gene3D Arf GTPase activating protein 2 129 IPR038508 -
Phac5g01261 474 MobiDBLite consensus disorder prediction 122 146 - -
Phac5g01261 474 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 474 IPR044520 GO:0005096
Phac5g01261 474 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Phac5g01261 474 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Phac5g01261 474 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Phac5g01261 474 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Phac5g01261 474 MobiDBLite consensus disorder prediction 439 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01261 Phac-Chr5 29152146 29157455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01261 16 123 C2H2 Transcription Factor Family AT4G05330 48.276 2.03e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01261 K12486 - gmx:100789910 749.969