Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac5g01236 | ATGAGTAGAGGTGGAAAAAACATGACAAAATTGGAAGCCGTGGAATATTTAAAAGAAGTGCAGATGATATTTGAAGACAAGGAAAAGTTTGTGGAGTTTTTGAAGATCATAACCGATTATAGAGTTCGCAGAATGACTGTTGGGAGTGTGGATCGATTTGAAGACACAGACGGTACCTACAAGGCATTTGTAAAGATATTAACTGATAGACACGAAAATGGCATGTCAGTTGGTGAAGTATACCATGAGGCAAGTGTTGTCTATGTTGAAAAACTTTTTGAGGGTCACCATGATCTTGTTTGTGATTTCGCTCTGTTTTTGCCATCTCATGATGCTTAA | 339 | 0.3776 | MSRGGKNMTKLEAVEYLKEVQMIFEDKEKFVEFLKIITDYRVRRMTVGSVDRFEDTDGTYKAFVKILTDRHENGMSVGEVYHEASVVYVEKLFEGHHDLVCDFALFLPSHDA* | 113 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac5g01236 | 112 | SUPERFAMILY | PAH2 domain | 7 | 44 | IPR036600 | GO:0006355 | |
Phac5g01236 | 112 | Gene3D | Paired amphipathic helix | 49 | 108 | IPR036600 | GO:0006355 | |
Phac5g01236 | 112 | SUPERFAMILY | PAH2 domain | 52 | 109 | IPR036600 | GO:0006355 | |
Phac5g01236 | 112 | PANTHER | SIN3B-RELATED | 52 | 112 | IPR039774 | GO:0003714 | |
Phac5g01236 | 112 | Pfam | Paired amphipathic helix repeat | 59 | 107 | IPR003822 | GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac5g01236 | Phac-Chr5 | 22661872 | 22664422 | Dispersed/Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Phac5g01236 | PAH | 1.6e-07 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac5g01236 | - | K10823 | var:108321439 | 123.25 |