Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01236 ATGAGTAGAGGTGGAAAAAACATGACAAAATTGGAAGCCGTGGAATATTTAAAAGAAGTGCAGATGATATTTGAAGACAAGGAAAAGTTTGTGGAGTTTTTGAAGATCATAACCGATTATAGAGTTCGCAGAATGACTGTTGGGAGTGTGGATCGATTTGAAGACACAGACGGTACCTACAAGGCATTTGTAAAGATATTAACTGATAGACACGAAAATGGCATGTCAGTTGGTGAAGTATACCATGAGGCAAGTGTTGTCTATGTTGAAAAACTTTTTGAGGGTCACCATGATCTTGTTTGTGATTTCGCTCTGTTTTTGCCATCTCATGATGCTTAA 339 0.3776 MSRGGKNMTKLEAVEYLKEVQMIFEDKEKFVEFLKIITDYRVRRMTVGSVDRFEDTDGTYKAFVKILTDRHENGMSVGEVYHEASVVYVEKLFEGHHDLVCDFALFLPSHDA* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01236 112 SUPERFAMILY PAH2 domain 7 44 IPR036600 GO:0006355
Phac5g01236 112 Gene3D Paired amphipathic helix 49 108 IPR036600 GO:0006355
Phac5g01236 112 SUPERFAMILY PAH2 domain 52 109 IPR036600 GO:0006355
Phac5g01236 112 PANTHER SIN3B-RELATED 52 112 IPR039774 GO:0003714
Phac5g01236 112 Pfam Paired amphipathic helix repeat 59 107 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01236 Phac-Chr5 22661872 22664422 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac5g01236 PAH 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01236 - K10823 var:108321439 123.25