Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01188 ATGCGGTTCTCTGCTACTTCCATCGGTGCTCAGGCGCTTCCCCGCCGTAACTCCGCCGCCGTGCTCTTAACCGTCTCCGCGAGATCTTCCGCAAAATCGAGGCTCAGGTTTATCAGAAGAACCTCCAACTTGAGCTTCCTCCGGAGGCGAAACTCTTTCTCCGTTGTGAAGTGCGTTTCCGGTAGCGAGGCCAGTAACACACTACACGATCCCATGGCTCAGCAACAAGGTCCAAAACTGTTGGCTGTTTTCTGCTATGGTTGTAAAGAAGGGGATGATAGCAGTGCTATGGATAAGAATGAATCGACTTCAGATTTCCAAAATTTTAAAATCATCTTTCAAGGATTGTCTGTAGCCTCTCATAGAAGTTTACTGGCTGGTGCTTTGATGCTTGCTGACAATGGCATTTTCTGCATTGATGAATTTGACAAGATGGACATCAGAGATCAGGTTGCCATTCACGAGGCCATGGAACATCAGACTATTAGTATCACAAAAGCAGGAATACAAGCAACGCTTAATGCTCGGACGTCCATTCTTGCCGCTGCCAATCCTGCTGGGGGACGCTATGATAAATCTAAACCACTTAAGTACAATGTGGTTCTTCCACCGGCTATACTTTCGAGGTTTGATCGAGCGGGAAGCTGCTCTTGCTCCAGCATTCATACAGCAGAACTGAAGCGTTATATAGCATATGCAAAAAATCTTAAACCAAAGCTCACGTCAGATTCAAGAAAACTTCTGGTAGACTCTTATGTTGCGCTTCGTAGAGGTTGTCAGAGGCCATCACACGGTTCAAATATATCTCCAGAAGATTCAATTGGTGTCATATTTGGTAAGGAGCATCCGGGTCGAGTTAGAGGACTATCATATGGAAGTGGTGCTCCATCACCTAATCAAGTAATAAGATCAAGTGCTGGAAGCAAAACTGATTAG 936 0.4562 MRFSATSIGAQALPRRNSAAVLLTVSARSSAKSRLRFIRRTSNLSFLRRRNSFSVVKCVSGSEASNTLHDPMAQQQGPKLLAVFCYGCKEGDDSSAMDKNESTSDFQNFKIIFQGLSVASHRSLLAGALMLADNGIFCIDEFDKMDIRDQVAIHEAMEHQTISITKAGIQATLNARTSILAAANPAGGRYDKSKPLKYNVVLPPAILSRFDRAGSCSCSSIHTAELKRYIAYAKNLKPKLTSDSRKLLVDSYVALRRGCQRPSHGSNISPEDSIGVIFGKEHPGRVRGLSYGSGAPSPNQVIRSSAGSKTD* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01188 311 MobiDBLite consensus disorder prediction 287 311 - -
Phac5g01188 311 MobiDBLite consensus disorder prediction 293 311 - -
Phac5g01188 311 Gene3D - 215 275 IPR027417 -
Phac5g01188 311 Gene3D - 14 214 IPR027417 -
Phac5g01188 311 SMART mcm 1 275 IPR031327 GO:0003677|GO:0005524|GO:0032508
Phac5g01188 311 Pfam MCM AAA-lid domain 225 260 IPR041562 -
Phac5g01188 311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 260 IPR027417 -
Phac5g01188 311 PRINTS Mini-chromosome maintenance (MCM) protein family signature 155 168 IPR001208 GO:0003677|GO:0005524|GO:0032508
Phac5g01188 311 PRINTS Mini-chromosome maintenance (MCM) protein family signature 127 141 IPR001208 GO:0003677|GO:0005524|GO:0032508
Phac5g01188 311 PRINTS Mini-chromosome maintenance (MCM) protein family signature 206 214 IPR001208 GO:0003677|GO:0005524|GO:0032508
Phac5g01188 311 PRINTS Mini-chromosome maintenance (MCM) protein family signature 179 191 IPR001208 GO:0003677|GO:0005524|GO:0032508
Phac5g01188 311 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 222 260 IPR031327 GO:0003677|GO:0005524|GO:0032508
Phac5g01188 311 ProSiteProfiles MCM family domain profile. 121 211 IPR001208 GO:0003677|GO:0005524|GO:0032508
Phac5g01188 311 Pfam MCM P-loop domain 123 211 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01188 Phac-Chr5 17688393 17691278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01188 126 262 Core DNA Replication Machinery Family AT5G44635 67.485 3.87e-63 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01188 K02542 - gmx:100787290 211.075