Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01184 ATGGGAGTTCCAGAGAAAGACCCTCTTGCCCAGCTGAGTCTACCTCCTGGTTTTCGATTCTACCCCACCGACGAGGAGCTTCTCGTTCAGTATCTCTGCCGCAAGGTCGCCGGCCACCATTTCTCTCTCCCAATCATTGCCGAAATTGATTTGTACAAGTTCGACCCATGGGTTCTTCCAAGCAAGGCGATTTTCGGGGAAAAAGAGTGGTACTTTTTCAGCCCTCGAGACAGGAAGTACCCAAACGGGTCTCGACCCAACAGAGTAGCCGGGTCGGGTTATTGGAAAGCCACCGGAACCGACAAGATCATCACCACCGAAGGTAGAAAAGTGGGCATAAAAAAAGCCCTGGTTTTTTACGTTGGCAAAGCTCCCAAAGGCACCAAAACCAATTGGATCATGCACGAGTATCGCCTTCTTGATTCTTCCCGAAAGACCACTGGTACCAAGCTGGATGATTGGGTTCTGTGTCGTATATACAAGAAGAACTCGAGTGCACAGAAGGCGGTGCAAAACGGCGTCGTTTCGAGCAGGGAACACACTCAATACAGCAACGGTTCCTCCTCGTCGTCATCGTCCCATCTGGACGACGTTCTGGAATCGCTGCCAACGATCGACGAACGGTGTTTCATGATGCCACGTGTGAGCACGGTGCAGCAACAGCATGAGGAGAAGGTGAACATTCAGAACATGGGTGCGGGTGGGTTGGTGGATTGGGCGAACCCTGCGGTTCTGAATCCGGTGGGTGATTTCGTTTCGGGGAATAATCAAGTGGTGCAGGAGCATACACAGGGGATGGTGAACTACAGCGGGTGCAATGACCTTTATGTTCCCACCTTCTGCCACGTGGACTCTGCGCTTCCGCAAAAGATGGAGGAAGAGGTGCAAAGCGGCGTGAGAACCCAAAACAGTAATAACTCGTGGTTTCTTCAGAACGATTTTACGCAGGGGTTTCAGAACTCGGTGGACACGTGTGGGTATAAGTTCCCGGTTCAGCCGGTGGGATTCGGGTTCAGGCATTGA 1023 0.52 MGVPEKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKTTGTKLDDWVLCRIYKKNSSAQKAVQNGVVSSREHTQYSNGSSSSSSSHLDDVLESLPTIDERCFMMPRVSTVQQQHEEKVNIQNMGAGGLVDWANPAVLNPVGDFVSGNNQVVQEHTQGMVNYSGCNDLYVPTFCHVDSALPQKMEEEVQSGVRTQNSNNSWFLQNDFTQGFQNSVDTCGYKFPVQPVGFGFRH* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01184 340 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Phac5g01184 340 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Phac5g01184 340 FunFam NAC domain-containing protein 72-like 23 167 - -
Phac5g01184 340 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Phac5g01184 340 MobiDBLite consensus disorder prediction 170 196 - -
Phac5g01184 340 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 224 - -
Phac5g01184 340 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01184 Phac-Chr5 17603171 17605351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01184 1 284 NAC Transcription Factor Family AT3G15500 60.535 1.24e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac5g01184 NAM 6.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01184 - - gmx:100170718 628.632