Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01183 ATGGAGAGCACCGACTCATCAACCGGTTCACAACAACAACCGCAATTGCCACCTGGGTTCCGGTTCCACCCCACTGACGAGGAGCTCGTCGTTCACTACCTCAAGAAAAAAACAGCTTCGGTTCCTCTTCCAGTCGCCATAATCGCTGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCCGCTAAGGCGACGTTTGGGGAGCAGGAGTGGTACTTCTTTAGTCCAAGGGACAGGAAGTATCCGAACGGCGCGAGGCCAAACAGGGCAGCCACATCTGGGTATTGGAAGGCCACTGGGACTGATAAGCCTGTGTTGACCTCTGGGGGAACCCAGAAGGTTGGGGTGAAAAAGGCTTTGGTTTTCTATGGAGGGAAGCCCCCAAGAGGGATCAAAACTAATTGGATCATGCATGAGTATAGGCTTGCTGATAACAAGCCTAACAATAGGCCTCCTGGCTGTGACTTGGGCAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGCTGTGCCGAATCTACAAGAAGAGCAACACGCACAGGTCTCCCATGGAGCATGACAGGGAAGATTCAATGGAAGACATGATTGGAGGGATTCCTCCTTCGATCAACGTGGGCCACATGAGTGGGAGGTATCATCTTTCAAAGATGTCCACAGGGTACAGCAGTGCATTGCTGGAAAATGACCAGAACTTGTTGGAAGGGATGATGATAGGGAACGGATCAGTGATGAACACGAGTACTACTACTACTACTAATGCTACACCTGGTGCCATGACCTCAAACTCCAAGGCAGAGCTTTCTTTTGTGCCAACCATGACTCACTCTTCCAACACCTCTAAAAGAACACTCTCGTCGCTGTATTGGAATGATGAGGATGTGGCTGGCACCTCATCATCCAACAAGAGGTTCAATTTGGAAAGTGGGGACAACAATCATGGAAGTGTAGTGAGAACTGATCAAGATAATGGCACTGCCACCTCTATTGTCACTCTGCTTAACCAGCTCCCTCAAACCCCTTCATTGCACCAACAATCAATGTTGGGATCAATAGGCGATGGACTACTTAGGACAACATATCAAATACCAGGAATGAATTGGTATGCTTAG 1113 0.487 MESTDSSTGSQQQPQLPPGFRFHPTDEELVVHYLKKKTASVPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPMEHDREDSMEDMIGGIPPSINVGHMSGRYHLSKMSTGYSSALLENDQNLLEGMMIGNGSVMNTSTTTTTNATPGAMTSNSKAELSFVPTMTHSSNTSKRTLSSLYWNDEDVAGTSSSNKRFNLESGDNNHGSVVRTDQDNGTATSIVTLLNQLPQTPSLHQQSMLGSIGDGLLRTTYQIPGMNWYA* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01183 370 MobiDBLite consensus disorder prediction 1 21 - -
Phac5g01183 370 MobiDBLite consensus disorder prediction 297 322 - -
Phac5g01183 370 FunFam NAC transcription factor 56 25 182 - -
Phac5g01183 370 ProSiteProfiles NAC domain profile. 16 177 IPR003441 GO:0003677|GO:0006355
Phac5g01183 370 PANTHER NAC TRANSCRIPTION FACTOR 56 16 228 - -
Phac5g01183 370 MobiDBLite consensus disorder prediction 1 18 - -
Phac5g01183 370 SUPERFAMILY NAC domain 10 177 IPR036093 GO:0003677|GO:0006355
Phac5g01183 370 Gene3D NAC domain 25 182 IPR036093 GO:0003677|GO:0006355
Phac5g01183 370 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01183 Phac-Chr5 17538315 17540586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01183 1 370 NAC Transcription Factor Family AT3G15510 54.404 1.04e-127 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac5g01183 NAM 3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01183 - - vra:106763825 715.687