Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01179 ATGGAGAATCAGCCTTCAAATGGAAGAAAAGCAATGGAAGAAGAGCTCAACAAAGGGCGTTACACAGCAAACCAGTTACTCCAAATACTTGTTCATAAATCCAACACTCTTCATAGAGATGCAGAAGTAGAAGGGTTAGTGTTACCATTTGTTGAAGATCTTGTTCGCAAGGTACAGAGATCGTTCTCAAATACCCTTTTGCTGTTGAACACTCATAGTGATATTTTCGATGGGGTTGTTATGCCTACCACTATCAATGATGTCTCTTCGTCCCTCAAATGCCCTAATCTTGAGGATAAGGATGGGGTTTGCAAGGGTTCCATCAACGCTAAAAGACGAAAAGTGTGTCGCAAGAGAAATGCACCAACATGGGAGAAGAACAGCTCACATCTGATGGAAGATGGCTATATATGGAGAAAGTATGGACAGAAAATGACCATGAATACAAAATACCTCAGGAGCTACTACAGATGCACTCACAAGTATGATCAGGGTTGTCCAGCAACCAAACAGGTTCAAAGGATTCAAGAGGACCCTCCATTGTACCGAACAACTTATTATGGTCATCACAATTGCAAAATCTCTTTGGGTCCCGAAATAATTTTGGAACCAGCTTCTTCTTCTGACTCTTCTATGTTCCTTAGCTTCAATACCACCTTCCCAAACAAAGAAGAATACCAATTTTCATCATCACTTTTTTCATCCACAAAACAGGAGCCTATGGAAGGGATTCCGGATGACGGTGGTATGCACAACCAACTAACCTCATCAGATTACCATCTGTTAGATGACTATGAGCTTGATTTCAATTGTTTGAGGCATGATACTATGCAGTCTATGCTATCCTCCACTGAATCTGTTCAATTTGATAAAGTTTATGGGAGTGGTATGGATTTTGATGGCTAG 906 0.4073 MENQPSNGRKAMEEELNKGRYTANQLLQILVHKSNTLHRDAEVEGLVLPFVEDLVRKVQRSFSNTLLLLNTHSDIFDGVVMPTTINDVSSSLKCPNLEDKDGVCKGSINAKRRKVCRKRNAPTWEKNSSHLMEDGYIWRKYGQKMTMNTKYLRSYYRCTHKYDQGCPATKQVQRIQEDPPLYRTTYYGHHNCKISLGPEIILEPASSSDSSMFLSFNTTFPNKEEYQFSSSLFSSTKQEPMEGIPDDGGMHNQLTSSDYHLLDDYELDFNCLRHDTMQSMLSSTESVQFDKVYGSGMDFDG* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01179 301 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01179 301 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g01179 301 ProSiteProfiles WRKY domain profile. 127 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01179 301 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 34 217 IPR044810 GO:0003700
Phac5g01179 301 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01179 301 SUPERFAMILY WRKY DNA-binding domain 128 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01179 Phac-Chr5 16906035 16909487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01179 51 192 WRKY Transcription Factor Family AT3G56400 40.268 2.43e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac5g01179 WRKY 1.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01179 - - gmx:102663141 405.601