Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01178 ATGGAGAATCAGATTCCAAATGGCAAAAGGGCAATGGAAGAAGAGCTGAACAGAGGGCGTGACATGGCAAATCAGTTGCTTGAAGTTCTTGCTCATGATAAATCAATCACTCATCTTGAAAAGGAAGAAGGATCAAAATCAGTGTTACCATTTGTTCAAGATCTTGTGCGCAAGGTTCTGTGTTCATTCACAAATACCCTTTTACTTTTGAACTCCTGCAACAATGTTTCCCATGAGGTGGCGACGTCTATCACTCTCAGAGATGTCTCTTCGTCCACCAGTTCCCCAGAGAAGTTGGAGTCTGTGGATGAAACTTGCAAGAGTCGCAATATTCTCAGCACTGAAAACCTAAGAAGAGGCTACAAGAGAAAATCAATTGCGCCAACTTGGGGGAAGGACAGCTGCATACTGGTTGAAGATGGCTATGTATGGAGAAAATATGGACAAAAAATGACAATGAACGCCAAATACCTAAGGAGCTACTACAGGTGCACTCACAAGAATGATCAGGGATGCCAAGCAATGAAACAGGTGCAGAGAATTCAAGATGATCCTCCTTTGTACCGAACAAACTATTATGGCCATCACACTTGTAAAAGCCATATGAATCCAGAGATTGTTTTGGAACCTCTTTCTCTCTCTGCCTCTTCCACATTACTTAGCTTTAATAACAGCCTCCATACCAAACAACAAAACCCGTTTCCCTCATCACTACTTGCTTCAAACAAGCATGAGCTCATGGAAGTGATTCACGATGAACATAGTGCTCAGAACCAGTTATCCTCTCTCCAAGACCTCTTATTGTATGATTGTGAAGTTTATTGCGATTATTCAAGGCGTGTGGCTATGCTATCATCCACTGAACCCCTTGAATTTGAGAATGCCTTTATCAGCAGTTTGGATTTTGCTGCCTAG 915 0.4219 MENQIPNGKRAMEEELNRGRDMANQLLEVLAHDKSITHLEKEEGSKSVLPFVQDLVRKVLCSFTNTLLLLNSCNNVSHEVATSITLRDVSSSTSSPEKLESVDETCKSRNILSTENLRRGYKRKSIAPTWGKDSCILVEDGYVWRKYGQKMTMNAKYLRSYYRCTHKNDQGCQAMKQVQRIQDDPPLYRTNYYGHHTCKSHMNPEIVLEPLSLSASSTLLSFNNSLHTKQQNPFPSSLLASNKHELMEVIHDEHSAQNQLSSLQDLLLYDCEVYCDYSRRVAMLSSTEPLEFENAFISSLDFAA* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01178 304 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 205 IPR044810 GO:0003700
Phac5g01178 304 ProSiteProfiles WRKY domain profile. 133 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01178 304 Gene3D WRKY domain 130 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g01178 304 Pfam WRKY DNA -binding domain 139 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01178 304 SMART WRKY_cls 138 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01178 304 SUPERFAMILY WRKY DNA-binding domain 136 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01178 Phac-Chr5 16857172 16859535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01178 15 200 WRKY Transcription Factor Family AT3G56400 36.364 5.56e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac5g01178 WRKY 2.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01178 - - var:108332714 490.73