Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01177 ATGGAGAATCAGCTTTCAAAAGAAAGAAGGGCAATGGAAGAAGAACTAGTCAGAGGGCGTGAGATAGCAAACCAGTTACTTGAAGTGTGTGTTCATAGATCCAACACTCATCATCATGAAGATGTACACATGCTTCCCTTCATTGAAGATCTTGTGCGCAAGGTGCTGTGTTCATTCACAAACACCCTTTTGCTTTTGAACACTGATAATGATGTCACCAATGAGGTTTCTATGCCTCTCACTGTCAAAGATACCCCTTCGTTTGCTAAATGTCCAAAACCCCAGCATACTGAGGAGGTTTGCAAGAGTTTCTTGCAAACTGAAAAACGAAGAGGGTACTACAAGAAAAAATCAAGTGCACCAACATGGGTGACTAACAGCTCAATTCTGATGGAAGATGGCTATGTATGGAGAAAGTATGGACAAAAGATAACAACGAATTCAAAATACTTCAGGAGCTACTATAGATGCACTCACAAACATGACAAGGGTTGTCCAGCAATCAAACAGGTTCAGAGAATTCAAGAAGACCCTCCATTGTACCGGACAACATATTATGGTAATCACAATTGCAAAAGCTATTCAAGTTCAGATATAATGATGGAATCAGCTTCTCCTTCTGGCTCTTCTGTGTTCCTTAGCTTCAGTAACACCTCGCCAACCAAACAACAATACCAATTACAGTCATCTTCACTTTCTTCATCCACGAAACAGGAGCCAGTGGAAGTGATTCAGGGTGAACTTACTGATGATCACAGCCCATTAGCCTCATCAGATTACCTCCTGTTGTGTGACTATGAACTTGATTTCAATTACATGGGGCATGTCACTACGCTATTTTAA 843 0.4093 MENQLSKERRAMEEELVRGREIANQLLEVCVHRSNTHHHEDVHMLPFIEDLVRKVLCSFTNTLLLLNTDNDVTNEVSMPLTVKDTPSFAKCPKPQHTEEVCKSFLQTEKRRGYYKKKSSAPTWVTNSSILMEDGYVWRKYGQKITTNSKYFRSYYRCTHKHDKGCPAIKQVQRIQEDPPLYRTTYYGNHNCKSYSSSDIMMESASPSGSSVFLSFSNTSPTKQQYQLQSSSLSSSTKQEPVEVIQGELTDDHSPLASSDYLLLCDYELDFNYMGHVTTLF* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01177 280 ProSiteProfiles WRKY domain profile. 126 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01177 280 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 253 IPR044810 GO:0003700
Phac5g01177 280 Gene3D WRKY domain 118 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g01177 280 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac5g01177 280 SUPERFAMILY WRKY DNA-binding domain 126 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac5g01177 280 Pfam WRKY DNA -binding domain 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01177 Phac-Chr5 16771993 16773279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01177 1 193 WRKY Transcription Factor Family AT3G56400 34.184 1.63e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac5g01177 WRKY 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01177 - - gmx:102659367 339.347