Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01152 ATGTACTCAAATACCCTCCTCCCAACCCTCATCTTCATCATTCTCCTCTATGAGATATACAGCATTGCAATCTGGCTCAGGAATCATAAAAGGGAGGTAGCTATAGCTAGGCCAATGAAGAGGAGCAGTTTGATGAAAGACTACACTCACAGTTGTGCCAGCAAGAACCCAACAAAAGACTTCACCCATGTTGCAAACTGCTACAACAAGCAGAACCAGATGGCTAAAGATTTGTGGGAGTGCAGCAGCAACTCTCACAGCAATGCAGATCAGGACTATGTGAATGGCTTCCCATGGCCTCCAAGATCATACACTTGTAGTTTCTGCAGGAAGGAGTTCAAGTCTGCTCAGGCACTTGGTGGACATATGAATGTTCATAGGAGGGATAGAGCACGGTTGAGGCAGTCACCCCCATCTGAAGGTCAAGGCCATATGTTCAACCTTAACCTTGACCCTACTACAACAAACCCTAACAACTCAACCTCATCTTGGTCCTTGTTACCATCATCTTCATCTTCACCGACTCACAAACCTGTCACTTGCACATTACCCTTGTTTGTTTCTCCCACTCCTTCTTCACCTTCTTCTGAGTTGAAGAGATGGGTTGTTGTGGATGGCATTCTGTTGAACCCTTTGACCACAAAGGCTCCAGAGCACTCTAAGTCAAAGATTCCAGAATCTTTATCAGGCGGGGTTGTAGAATACGATCATGTTTTTGCAAGAGAAGATGGGTGCAAAGTGTTGAAGAAAGGAGAGATTCTGAGGATGGACTTGGAGATAGGTTTGCCTAGAAGTTATGATTTGGATCTGGAGCTTCGTTTGGGTACTACTTACTCTTAG 840 0.45 MYSNTLLPTLIFIILLYEIYSIAIWLRNHKREVAIARPMKRSSLMKDYTHSCASKNPTKDFTHVANCYNKQNQMAKDLWECSSNSHSNADQDYVNGFPWPPRSYTCSFCRKEFKSAQALGGHMNVHRRDRARLRQSPPSEGQGHMFNLNLDPTTTNPNNSTSSWSLLPSSSSSPTHKPVTCTLPLFVSPTPSSPSSELKRWVVVDGILLNPLTTKAPEHSKSKIPESLSGGVVEYDHVFAREDGCKVLKKGEILRMDLEIGLPRSYDLDLELRLGTTYS* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01152 279 Pfam C2H2-type zinc finger 104 128 - -
Phac5g01152 279 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
Phac5g01152 279 SUPERFAMILY beta-beta-alpha zinc fingers 101 130 IPR036236 -
Phac5g01152 279 SMART c2h2final6 104 126 IPR013087 -
Phac5g01152 279 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Phac5g01152 279 Gene3D Classic Zinc Finger 100 145 - -
Phac5g01152 279 MobiDBLite consensus disorder prediction 140 174 - -
Phac5g01152 279 PANTHER OS07G0101800 PROTEIN 79 276 - -
Phac5g01152 279 MobiDBLite consensus disorder prediction 134 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01152 Phac-Chr5 16005621 16006576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01152 79 275 C2H2 Transcription Factor Family AT3G23130 41.791 2.01e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac5g01152 zf-C2H2_6 1.8e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01152 - - var:108333719 389.037