Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01130 ATGATCAAGATGCGGTTTGTGATGTCTTCAAGCTCCAAACATGTCTGCCTGATCTTCACTTTTTGCTTTCTGGCTTTGAATCACTTTCAACACTTTGGATCTAATGCTCAACTCATACCACAACATGAAGTTAAAATACTCCAAACAATATCAGACAAGGTGGAGAACTTGAATTGGAAAGTTACACAACGTTCCTGCAAAGGGGATAGAGGGTTTGATAACAGGAAGATTTCAAGGGATGAGGAACAAATCATAAGGAATGTCACTTGCGATTGTTCTTTCAACGATGGCACTGTTTGCCATGTAACATCCATTGCACTGAAGGGTATCAATATATCTGGACCTTTGCCCGATGAATTTGGAAATCTAACTCGACTGCAAATACTTGATCTCACTCGGAACTATTTTAATGGCTCAATTCCAAAAGCCCTTGGACGCCTCTCATCAGTTGTAGTTCTGTCACTTCTCGGAAACCGACTTACTGGTTCAATTCCTTCAGAAATTAGTGATATGACTAGTCTGCAAGAACTGAACTTGGAAGATAATCAACTTGAAGGACATCTTCCCCCAAGCCTTGGAAAAATGAGCAATTTGCTGAGATTACTTCTCTCTGCAAATAATTTCACAGGGACGATACCAGAAGCATATGGAAAACTAAAGAATCTCACTCAGTTTAGGATAGATGGGAGCACTTTGTCTGGGAAGATACCCAGTTTTATTGGGAACTGGACCAAACTTGATAGACTGGATTTGCAGGGCACATCCTTGGAAGGTCCAATTCCTTCTGTCATATCTGAATTGATCTATTTGACAGAACTGAGAATATCTGATTTGAAGGGACCAACCATGACATTTCCTAATCTGACGAATATGAAACTCTTGCAAAGACTAGAATTGAGAAATTGCTTAATTACTGGTCAAATTCCTAGTTACATTGGAGAAATGCAAAGTTTAAAAACTCTAGATCTGAGCTCCAACATGCTGACTGGTCCAATCCCAGATTCGTTACAGGACATGGAAAAAATAAATTACTTGTTTCTAACTAACAATTCTCTAAGTGGACGAATTCCTGATTGGATACAAGACTTCAAACAGAACATTGATTTATCTTTGAACAATTTTAGTGAGAGTTTTTCAAATGGTTGCCAGATCTTGGATGTGAACTTAGCTTCAAGCCTCACTCCCTCGGCAAACACTTCATCGTCTTGTTTGAAGATGGGCCAACCTTGTTCTGGAAAACCCCGGTCTCATTCACTGTTCATAAACTGTGGAGGACCTGAAATAGAGTTTGAGGGCAATGAATATAAAGCCGACCTCAGTCTACGAGGCATATCAAACTATGTTCTTAGTGATGATGGCAAATGGGCATATAGCAGCACTGGAGTATATCTAGGAAGGGATAAGGCTGATTATGTAGCAAAAAATCAGTTTAATCTGAATATTAATGGCTCTGAATACTACCAAACAGCCCGCATGGCCCCACTATATCTTAATTATTATGGTCTTTGTATGCTGAATGGCAATTATAAAGTGAAACTTCATTTTGCTGAGATAACATTCTCTGATGACAATGCATTTACCAGCCTTGGAAAGCGTGTATTTGATGTTTCAATCCAAGGTTTTAAATATTTGAAAGATTTTAACATTGTGAAAGAAGCTGGTGGAGTTGGTAAGGGAATCACCAGGGAGTTTAATGTGAATGTTACCCACAATACCTTGGAAATCCACTTATCCTGGGCAGGTAAAGGAACTAATGCTATTCCTGTAAGAGGTATATATGGACCTCTTATATCCGCTATCACTGTGACCCCAAACTTTAAAGTTCCTTCACATGGGCTGTCTACTGGAGCAATTGCTGGAATTGTGGTTGGGATATGTGTGTTCATCATATTGATACTCCTTGCACTTTGGAAGATGGGTTTCCTATGTGGGAAAGATGAAACCGACCAAGAACTTCTAGGTTTGAAGACAGGTTATTTCAGTTTAAGACAGATTAAAGCTGCTACTAAGAACTTTGATCCAGCAAATAAGATAGGTGAAGGAGGCTTTGGACCAGTATACAAGGGTGTACTGTCAGACGGTGCTGTGATTGCTGTTAAGCAGCTTTCCTCCAAATCAAAGCAAGGGAATCGCGAATTCATCAATGAAATAGGCATGATATCTGCTTTGCAGCATCCAAATCTTGTGAAACTTTATGGCTGTTGCATTGAAGGGAACCAGTTGCTTCTAGTATATGAATATATGGAGAACAATAGTCTTGCTCGTGCACTTTTTGGTAAAGAACACGAGAGGATGCAATTGGACTGGCCCAGAAGAATGAAGATTTGTGTGGGGATTGCAAAGGGATTAGCCTATCTCCATGAGGAGTCAAGGTTGAAAATAGTACACAGGGATATTAAAGCAACCAATGTCTTGCTTGATAAACATATGAAAGCCAAGATCTCTGACTTTGGTTTAGCCAAACTTGATGAAGAAGAGAATACCCATATTAGTACAAGAATAGCTGGGACAATTGGTTACATGGCTCCTGAGTATGCTATGCGGGGTTACTTGACTGACAAAGCAGATGTCTATAGCTTTGGTGTTGTAGCTTTAGAGATTGTTAGTGGAAAGAGCAACACAAATTACAGGCCAAAGGAGGAGTTTGTGTATCTTTTGGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTTCTGGATTTGGTGGATCCAAGTCTTGGTTCAAAGTACTCCTCAGAAGAGGCCATGAGAATGCTGCAGTTAGCACTCTTGTGCACCAATCCTTCTCCCACTCTTAGACCACCTATGTCATCGGTAGTGAGCATGCTTGAGGGAAAAACACCGATTCAACCACCACCAATAATCAAAGGCAGTGACTATGCACAAGATGCGAGATTTAAATCTTTTGAGTTGCTATCACAAGACAGCCAAACTCATGTCTCTTCTGCTTTCTCTCAAGATAGCATGGAGCAAAGAAGCAAGTCAATGGGGGGACCATGGGCTGATTCCACCATATCTCTGGCAAGTAGAACCGATCATTCTTCTAGCGATAAACTTCTTAAAAGTTCAAATGACGAGTGCTTCGAAGTTGGGGCAGTCCACTCATTAAATTCAAATTCTTTTGTTAAGGATAGAACAAAAAACAGTTAG 3150 0.4022 MIKMRFVMSSSSKHVCLIFTFCFLALNHFQHFGSNAQLIPQHEVKILQTISDKVENLNWKVTQRSCKGDRGFDNRKISRDEEQIIRNVTCDCSFNDGTVCHVTSIALKGINISGPLPDEFGNLTRLQILDLTRNYFNGSIPKALGRLSSVVVLSLLGNRLTGSIPSEISDMTSLQELNLEDNQLEGHLPPSLGKMSNLLRLLLSANNFTGTIPEAYGKLKNLTQFRIDGSTLSGKIPSFIGNWTKLDRLDLQGTSLEGPIPSVISELIYLTELRISDLKGPTMTFPNLTNMKLLQRLELRNCLITGQIPSYIGEMQSLKTLDLSSNMLTGPIPDSLQDMEKINYLFLTNNSLSGRIPDWIQDFKQNIDLSLNNFSESFSNGCQILDVNLASSLTPSANTSSSCLKMGQPCSGKPRSHSLFINCGGPEIEFEGNEYKADLSLRGISNYVLSDDGKWAYSSTGVYLGRDKADYVAKNQFNLNINGSEYYQTARMAPLYLNYYGLCMLNGNYKVKLHFAEITFSDDNAFTSLGKRVFDVSIQGFKYLKDFNIVKEAGGVGKGITREFNVNVTHNTLEIHLSWAGKGTNAIPVRGIYGPLISAITVTPNFKVPSHGLSTGAIAGIVVGICVFIILILLALWKMGFLCGKDETDQELLGLKTGYFSLRQIKAATKNFDPANKIGEGGFGPVYKGVLSDGAVIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYMENNSLARALFGKEHERMQLDWPRRMKICVGIAKGLAYLHEESRLKIVHRDIKATNVLLDKHMKAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLDLVDPSLGSKYSSEEAMRMLQLALLCTNPSPTLRPPMSSVVSMLEGKTPIQPPPIIKGSDYAQDARFKSFELLSQDSQTHVSSAFSQDSMEQRSKSMGGPWADSTISLASRTDHSSSDKLLKSSNDECFEVGAVHSLNSNSFVKDRTKNS* 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01130 1049 Pfam Protein tyrosine and serine/threonine kinase 676 941 IPR001245 GO:0004672|GO:0006468
Phac5g01130 1049 Gene3D Ribonuclease Inhibitor 178 280 IPR032675 -
Phac5g01130 1049 MobiDBLite consensus disorder prediction 981 1013 - -
Phac5g01130 1049 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 23 976 - -
Phac5g01130 1049 Gene3D Phosphorylase Kinase; domain 1 642 747 - -
Phac5g01130 1049 SMART LRR_typ_2 123 147 IPR003591 -
Phac5g01130 1049 SMART LRR_typ_2 315 338 IPR003591 -
Phac5g01130 1049 SMART LRR_typ_2 171 195 IPR003591 -
Phac5g01130 1049 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Phac5g01130 1049 CDD STKc_IRAK 678 945 - -
Phac5g01130 1049 Gene3D Ribonuclease Inhibitor 281 406 IPR032675 -
Phac5g01130 1049 Gene3D Transferase(Phosphotransferase) domain 1 748 950 - -
Phac5g01130 1049 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 193 223 IPR000225 GO:0005515
Phac5g01130 1049 Gene3D - 416 605 - -
Phac5g01130 1049 MobiDBLite consensus disorder prediction 981 1019 - -
Phac5g01130 1049 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 285 378 - -
Phac5g01130 1049 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Phac5g01130 1049 Pfam Leucine rich repeat 294 352 IPR001611 GO:0005515
Phac5g01130 1049 SUPERFAMILY Protein kinase-like (PK-like) 656 944 IPR011009 -
Phac5g01130 1049 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 643 747 - -
Phac5g01130 1049 SMART serkin_6 672 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01130 1049 Gene3D Ribonuclease Inhibitor 47 173 IPR032675 -
Phac5g01130 1049 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 416 605 - -
Phac5g01130 1049 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 40 279 - -
Phac5g01130 1049 SUPERFAMILY L domain-like 98 361 - -
Phac5g01130 1049 ProSiteProfiles Protein kinase domain profile. 672 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01130 1049 FunFam Putative LRR receptor-like serine/threonine-protein kinase 748 953 - -
Phac5g01130 1049 Pfam Malectin domain 419 600 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01130 Phac-Chr5 15173282 15184608 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01130 10 1010 Receptor kinase-like Gene Family AT1G53440 60.277 0.0 1195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac5g01130 PK_Tyr_Ser-Thr 1.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01130 - - gmx:121173337 1712.58