Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01127 ATGCCCTACTTAGTGTATCCAGAGCTAAAAGGTTTAGAATTAAGAACAAGTTTATTCACTTTAAGACAAATAAAAGTAGCAACAAACAATTTTGATGAGGTGAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGATGTCTATCAGATGGGACTTTAATAGCAGTAAAGCTACTCTCTTCTAAATCAAGACAAGGGAATCGAGAGTTCTTAAATGAGATAGGAATGATTTCTGCTTTGCAACATCCTTATCTTGTTAAACTCTATGGATGTTGTAGAAGGAGATCAACTATTGTTGATATATGA 312 0.3462 MPYLVYPELKGLELRTSLFTLRQIKVATNNFDEVNKIGEGGFGPVYKGCLSDGTLIAVKLLSSKSRQGNREFLNEIGMISALQHPYLVKLYGCCRRRSTIVDI* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01127 103 SUPERFAMILY Protein kinase-like (PK-like) 14 98 IPR011009 -
Phac5g01127 103 Pfam Protein kinase domain 32 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01127 103 ProSiteProfiles Protein kinase domain profile. 31 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01127 103 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 3 103 - -
Phac5g01127 103 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 96 - -
Phac5g01127 103 Gene3D Phosphorylase Kinase; domain 1 7 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01127 Phac-Chr5 14969455 14969902 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01127 8 94 Receptor kinase-like Gene Family AT1G53440 79.310 3.44e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac5g01127 Pkinase 1.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01127 - - gmx:732563 161.77