Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01125 ATGGCTCCAGAATATGCCATGCATGGTTATTTAACTGATAAAGCAGATGTCTACAGCTTTGGAATTGTTGTCTTGGAAATTGTAAATGGAAAGAACAATATCATTCACCGACAAAAAGAAGAATCATTCTCCATTCTTGATTGGTGTTATGGCTTACCGATCACTTTATGGAACAAAGATTGCTTTGCAAGAGTGGTAGGTGAAGTGACCACTTTGATCTCTGTTGACAAAGCCACGTTGATGTGGGAAAATCTACAGTTCGCCCGTTTGAAAATCCGTCTAGAGAATGATTGCTATGTTAGGGTGGCAAAGAAGATGAGGATCAACGACCAAATGCTATGTATCTCTATTGTAGAGGAGCTCCCAGTTTTCACAGCAGGCCAGTGCAAAGGTTACCATTACAGCTATGATTCATCAGATAGCATTTCCTCTTCAGAAACCTATGTTGAAGAATCTGTCTTCTCCGTGAAAAGTGGTGAGGAAGAATGCAGCCGTAGGGCAGGGGAGGAGCTCCGGCCAAACGGAAAGGAGGTCGGATAA 540 0.4259 MAPEYAMHGYLTDKADVYSFGIVVLEIVNGKNNIIHRQKEESFSILDWCYGLPITLWNKDCFARVVGEVTTLISVDKATLMWENLQFARLKIRLENDCYVRVAKKMRINDQMLCISIVEELPVFTAGQCKGYHYSYDSSDSISSSETYVEESVFSVKSGEEECSRRAGEELRPNGKEVG* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01125 179 Gene3D Transferase(Phosphotransferase) domain 1 1 104 - -
Phac5g01125 179 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 49 - -
Phac5g01125 179 MobiDBLite consensus disorder prediction 157 179 - -
Phac5g01125 179 Pfam Protein tyrosine and serine/threonine kinase 1 43 IPR001245 GO:0004672|GO:0006468
Phac5g01125 179 SUPERFAMILY Protein kinase-like (PK-like) 1 57 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01125 Phac-Chr5 14968089 14968732 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01125 1 52 Receptor kinase-like Gene Family AT1G53440 71.154 1.86e-18 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac5g01125 PK_Tyr_Ser-Thr 7.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01125 - - pvu:PHAVU_008G166100g 125.561