LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac5g01119	ATGTATACTTCTAACTATTTTTCAATTTTTGGTGACAGAGCTCTGAAATCACAGAGTCTTCAAGGCATTCTCCCCCCACATCTGAGCAAATTACCTTATCTCCAAGAAATTGAACTCAGTCGTAACTACCTCAGTGGTTCAATTCCTAGAGAATGGGGCTCCTCCAACCTTCAAAAAATTTCCCTTCTTGGAAACAGACTAACTGGTCCAATCCCAAGTGAGCTGGGAAACCTCACCAATCTTACACGCTTGATTCTTGAGTTCAATCAATTATCTGGAAATCTTCCTTCAGAGCTTGGAAATCTTGTCCACATTGAAAAACTGCATCTAAGCTCCAATAACTTCACTGGTCAATTGCCTGCAAATCTTTCGAGTCTTGCTGCAATGAAACAATTCCGAATAAATGACAACCAGTTATCTGGCAACATACCTGATTGGCTTCAGAATTTGACAAGTCTTGGTCAACTACATATGCAAGGGAGTGGTTTGAGTGGACCAATTCCTCCTGGAATTTCAGATCTAAACTTAACAGACTTGAGGATTAGTGACTTGAATGGACCTGATTCTACTTTTCCACCACTTCAAAATATGAAAAGTCTAGATACTTTGATATTAAGGAGTTGCAATATCAAGGACACATTTCCTCAGTATCTTGCAGAGCTGTCGATTTTGAAGGTTTTAGACCTAAGCTATAACAAATTATATGGACCAGTCCCAAGAAACCTTCAACAATTAATAGCAGCAGCAGCCAATATATATTTAGCAGGAAACTTCTTCACTGGACCGGTGCCTGAGTGGACAGTGGACAATAACAGAAGTTTAGATCTTTCATATAACAACTTTAGTGTTGGAAACCAAGAGCCAAAGACATGCAACCAGCAAAATGTGAACTTGTTTGCAAGCTTCTCAAGGAATAACTTAGGACCAGTGTCTTGTGACAGCAGCAATAGAACCTGTACTAAAAAAGTTACATCTCTACACATAAATTGTGGTGGAAACCAGACTACTATTGGAGGTATAACATATGATGAAGATCTATATCCTGCTGGACCAGCAGTATATAAACAAAGTGGAAAGAATTGGGCATTGAGCAACACGGGTCACTTCATGGACAATGATACTATTCCTCAAGGACAGTTTCTACCCTATACCACAGAAAATGAAACTAGACTTGACATGACTAATGCTGAGTTATATAAGAATGCACGTGTTTCTCCTATGTCATTGACTTATTATGGATTTTGCTTAGCAAATGGAGTCTACACAGTAAAGCTTCACTTTGCTGAGATAATGTTCACTGATGATAACACATACAGCGACTTAGGGAGGCGTGTATTTGATGTATACATTCAGGGAGAGCGAGTGTTGAAAGATTTTAACATTGCAAATGAAGCACAAGGAGTTGGAAAGGAACTCATAAAAGAATTTGTTGCTCATGTGAGTGGTAATGACCTGGAGATCCGCTTCTACTGGGCAGGCAAAGGGACAACATATATCCCATATAAATCAGTAAATGGTCCTCTTATATCTGCCCTTTCTGTTACATATGGTGGGTTTTCATATTCTACAGGTGGCTTTTCTGTAGGACTTATTGTTGTAATTGCAGTTGCATTGATGATTGTTGTCATCTTGATTACTGTTAGCGTACTTCGTTGGAGGGGTCTCATTAATTGTTGTCATCTTGATACTTGTTGGCATTCTTTGGTGGAGGGGCTAAGGTCTAAGTCAAAATTCGGACGTCATTTTGGTGGAAATGAACATTTATTAATGAAAGGTCTCAGGGATATAGAACTGCTAACTGGTGTTTTTACCTTGCATCAAATCAAAGTTGCAACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGCTTCGGTCCTGTTTATAAGGGAATTCTGCCAAACAGCAAACCGATAGCAGTTAAACAACTTTCATCTAACTCAGACCAAGGAACCCGTGAGTTTATAAATGAGATAGGCATGATCTCTGCTCTACAACACCCTAATCTTGTTAAACTTTATGGTTGCTGTGCTGAGGGTGATCAATTGTTGTTAGTGTATGAATATATGGAAAACAATAGCCTTGCACATGCTTTATTTGACTCAGAAGATAGCCATTTAAAATTGAATTGGCCAACAAGAAAAAATATTTGTCTTGGCATTGCTAGAGGTTTGGCTTTCCTGCATGAAGAATCAAGACTGAGAGTTGTTCACAGAGACTTAAAGACCTCTAATGTGTTGCTTGATGAAGACCTAAACCCTAAGATATCTGATTTTGGTTTGGCCAGACTTCGTGTAGGGGACAATACACACATAAGCACCAGAATTGCAGGGACTTGGGGATATATGGCTCCTGAGTATGCAATGCATGGTTATCTAACTGAAAAAGCAGATGTTTTTAGTTTTGGAGTTGTTATCTCGGAAATTGTAAGTGGAAAGAGAAACATTATTCGACAGTCAAAGGGGGAAGCTTTCTATCTTCTGGATTGGGCACGTTTGTTGAGTGAGAGAGGTAACATAATGGAGCTAGTTGATCCAAAGTTGAATTTAGATGTCAATGAAGATGAGGTAAGGTTGATTGTCAAAGTGGCTCTCCTTTGCACCCATGTCACTTCAAGCTACAGGCCCTGTATGTCTTCAGTGCTAAGCATGCTTGAAGGCAGAACAATGGTCTCAGAGTTTGATTCACATTGTAGTGAAGTAATGGATGAGATGAAGCTGGAGGTAATGAGAGAGTTTTACAGTCAAATGGATGAAAATAAAACAAGTGACACTCGAAGTTTGAGCTTAACAAAAGGTGTTCCATGGACTGATTCTTCTTCAACGGCTACAGACCTTAATTTGGTTCAGCTTGATCCTTAA	2865	0.3913	MYTSNYFSIFGDRALKSQSLQGILPPHLSKLPYLQEIELSRNYLSGSIPREWGSSNLQKISLLGNRLTGPIPSELGNLTNLTRLILEFNQLSGNLPSELGNLVHIEKLHLSSNNFTGQLPANLSSLAAMKQFRINDNQLSGNIPDWLQNLTSLGQLHMQGSGLSGPIPPGISDLNLTDLRISDLNGPDSTFPPLQNMKSLDTLILRSCNIKDTFPQYLAELSILKVLDLSYNKLYGPVPRNLQQLIAAAANIYLAGNFFTGPVPEWTVDNNRSLDLSYNNFSVGNQEPKTCNQQNVNLFASFSRNNLGPVSCDSSNRTCTKKVTSLHINCGGNQTTIGGITYDEDLYPAGPAVYKQSGKNWALSNTGHFMDNDTIPQGQFLPYTTENETRLDMTNAELYKNARVSPMSLTYYGFCLANGVYTVKLHFAEIMFTDDNTYSDLGRRVFDVYIQGERVLKDFNIANEAQGVGKELIKEFVAHVSGNDLEIRFYWAGKGTTYIPYKSVNGPLISALSVTYGGFSYSTGGFSVGLIVVIAVALMIVVILITVSVLRWRGLINCCHLDTCWHSLVEGLRSKSKFGRHFGGNEHLLMKGLRDIELLTGVFTLHQIKVATNNFDISNKIGEGGFGPVYKGILPNSKPIAVKQLSSNSDQGTREFINEIGMISALQHPNLVKLYGCCAEGDQLLLVYEYMENNSLAHALFDSEDSHLKLNWPTRKNICLGIARGLAFLHEESRLRVVHRDLKTSNVLLDEDLNPKISDFGLARLRVGDNTHISTRIAGTWGYMAPEYAMHGYLTEKADVFSFGVVISEIVSGKRNIIRQSKGEAFYLLDWARLLSERGNIMELVDPKLNLDVNEDEVRLIVKVALLCTHVTSSYRPCMSSVLSMLEGRTMVSEFDSHCSEVMDEMKLEVMREFYSQMDENKTSDTRSLSLTKGVPWTDSSSTATDLNLVQLDP*	955

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac5g01119	954	ProSiteProfiles	Protein kinase domain profile.	615	892	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g01119	954	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	323	517	-	-
	Phac5g01119	954	Gene3D	Ribonuclease Inhibitor	3	104	IPR032675	-
	Phac5g01119	954	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	584	690	-	-
	Phac5g01119	954	Pfam	Protein kinase domain	617	825	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g01119	954	CDD	STKc_IRAK	621	888	-	-
	Phac5g01119	954	Gene3D	Ribonuclease Inhibitor	105	312	IPR032675	-
	Phac5g01119	954	FunFam	Leucine-rich repeat receptor protein kinase EMS1	53	139	-	-
	Phac5g01119	954	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	691	898	-	-
	Phac5g01119	954	SUPERFAMILY	L domain-like	19	281	-	-
	Phac5g01119	954	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	737	749	IPR008271	GO:0004672\|GO:0006468
	Phac5g01119	954	Pfam	Malectin domain	325	512	IPR021720	-
	Phac5g01119	954	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	15	921	-	-
	Phac5g01119	954	Gene3D	-	321	517	-	-
	Phac5g01119	954	SUPERFAMILY	Protein kinase-like (PK-like)	599	896	IPR011009	-
	Phac5g01119	954	Gene3D	Transferase(Phosphotransferase) domain 1	691	905	-	-
	Phac5g01119	954	Gene3D	Phosphorylase Kinase; domain 1	588	690	-	-
	Phac5g01119	954	SMART	serkin_6	615	886	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac5g01119	Phac-Chr5	14883907	14892915	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac5g01119	13	946	Receptor kinase-like Gene Family	AT1G53420	49.627	0.0	893

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Phac5g01119		Pkinase	5e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac5g01119	-		-	vra:106779468	1650.57