LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac5g01118	ATGTATACTTCTAACTATTTTTCAATTTTTGGTGACAGAGCTCTGAAATCACAGAGTCTTCAAGGCATTCTCCCCCCACATCTGAGCAAATTACCTTATCTCCAAGAAATTGAACTCAGTCGTAACTACCTCAGTGGTTCAATTCCTAGAGAATGGGGCTCCTCCAACCTTCAAAAAATTTCCCTTCTTGGAAACAGACTAACTGGTCCAATCCCAAGTGAGCTGGGAAACCTCACCAATCTTACACGCTTGATTCTTGAGTTCAATCAATTATCTGGAAATCTTCCTTCAGAGCTTGGAAATCTTGTCCACATTGAAAAACTGCATCTAAGCTCCAATAACTTCACTGGTCAATTGCCTGCAAATCTTTCGAGTCTTGCTGCAATGAAACAATTCCGAATAAATGACAACCAGTTATCTGGCAACATACCTGATTGGCTTCAGAATTTGACAAGTCTTGGTCAACTACATATGCAAGGGAGTGGTTTGAGTGGACCAATTCCTCCTGGAATTTCAGATCTAAACTTAACAGACTTGAGGATTAGTGACTTGAATGGACCTGATTCTACTTTTCCACCACTTCAAAATATGAAAAGTCTAGATACTTTGATATTAAGGAGTTGCAATATCAAGGACACATTTCCTCAGTATCTTGCAGAGCTGTCGATTTTGAAGGTTTTAGACCTAAGCTATAACAAATTATATGGACCAGTCCCAAGAAACCTTCAACAATTAATAGCAGCAGCAGCCAATATATATTTAGCAGGAAACTTCTTCACTGGACCGGTGCCTGAGTGGACAGTGGACAATAACAGAAGTTTAGATCTTTCATATAACAACTTTAGTGTTGGAAACCAAGAGCCAAAGACATGCAACCAGCAAAATGTGAACTTGTTTGCAAGCTTCTCAAGGAATAACTTAGGACCAGTGTCTTGTGACAGCAGCAATAGAACCTGTACTAAAAAAGTTACATCTCTACACATAAATTGTGGTGGAAACCAGACTACTATTGGAGGTATAACATATGATGAAGATCTATATCCTGCTGGACCAGCAGTATATAAACAAAGTGGAAAGAATTGGGCATTGAGCAACACGGGTCACTTCATGGACAATGATACTATTCCTCAAGGACAGTTTCTACCCTATACCACAGAAAATGAAACTAGACTTGACATGACTAATGCTGAGTTATATAAGAATGCACGTGTTTCTCCTATGTCATTGACTTATTATGGATTTTGCTTAGCAAATGGAGTCTACACAGTAAAGCTTCACTTTGCTGAGATAATGTTCACTGATGATAACACATACAGCGACTTAGGGAGGCGTGTATTTGATGTATACATTCAGGGAGAGCGAGTGTTGAAAGATTTTAACATTGCAAATGAAGCACAAGGAGTTGGAAAGGAACTCATAAAAGAATTTGTTGCTCATGTGAGTGGTAATGACCTGGAGATCCGCTTCTACTGGGCAGGCAAAGGGACAACATATATCCCATATAAATCAGTAAATGGTCCTCTTATATCTGCCCTTTCTGTTACATATGATTCTACAGGTGGCTTTTCTGTAGGACTTATTGTTGTAATTGCAGTTGCATTGATGATTGTTGTCATCTTGATTACTGTTAGCGTACTTCGTTGGAGGGGTCTCATTAATTGTTGTCATCTTGATACTTGTTGGCATTCTTTGGTGGAGGGGCTAAGGTCTAAGTCAAAATTCGGACGTCATTTTGGTGGAAATGAACATTTATTAATGAAAGGTCTCAGGGATATAGAACTGCTAACTGGTGTTTTTACCTTGCATCAAATCAAAGTTGCAACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGCTTCGGTCCTGTTTATAAGGGAATTCTGCCAAACAGCAAACCGATAGCAGTTAAACAACTTTCATCTAACTCAGACCAAGGAACCCGTGAGTTTATAAATGAGATAGGCATGATCTCTGCTCTACAACACCCTAATCTTGTTAAACTTTATGGTTGCTGTGCTGAGGGTGATCAATTGTTGTTAGTGTATGAATATATGGAAAACAATAGCCTTGCACATGCTTTATTTGACTCAGAAGATAGCCATTTAAAATTGAATTGGCCAACAAGAAAAAATATTTGTCTTGGCATTGCTAGAGGTTTGGCTTTCCTGCATGAAGAATCAAGACTGAGAGTTGTTCACAGAGACTTAAAGACCTCTAATGTGTTGCTTGATGAAGACCTAAACCCTAAGATATCTGATTTTGGTTTGGCCAGACTTCGTGTAGGGGACAATACACACATAAGCACCAGAATTGCAGGGACTTGGGGATATATGGCTCCTGAGTATGCAATGCATGGTTATCTAACTGAAAAAGCAGATGTTTTTAGTTTTGGAGTTGTTATCTCGGAAATTGTAAGTGGAAAGAGAAACATTATTCGACAGTCAAAGGGGGAAGCTTTCTATCTTCTGGATTGGGCACGTTTGTTGAGTGAGAGAGGTAACATAATGGAGCTAGTTGATCCAAAGTTGAATTTAGATGTCAATGAAGATGAGGTAAGGTTGATTGTCAAAGTGGCTCTCCTTTGCACCCATGTCACTTCAAGCTACAGGCCCTGTATGTCTTCAGTGCTAAGCATGCTTGAAGGCAGAACAATGGTCTCAGAGTTTGATTCACATTGTAGTGAAGTAATGGATGAGATGAAGCTGGAGGTAATGAGAGAGTTTTACAGTCAAATGGATGAAAATAAAACAAGTGACACTCGAAGTTTGAGCTTAACAAAAGGTGTTCCATGGACTGATTCTTCTTCAACGGCTACAGACCTTAATTTGGTTCAGCTTGATCCTTAA	2853	0.3912	MYTSNYFSIFGDRALKSQSLQGILPPHLSKLPYLQEIELSRNYLSGSIPREWGSSNLQKISLLGNRLTGPIPSELGNLTNLTRLILEFNQLSGNLPSELGNLVHIEKLHLSSNNFTGQLPANLSSLAAMKQFRINDNQLSGNIPDWLQNLTSLGQLHMQGSGLSGPIPPGISDLNLTDLRISDLNGPDSTFPPLQNMKSLDTLILRSCNIKDTFPQYLAELSILKVLDLSYNKLYGPVPRNLQQLIAAAANIYLAGNFFTGPVPEWTVDNNRSLDLSYNNFSVGNQEPKTCNQQNVNLFASFSRNNLGPVSCDSSNRTCTKKVTSLHINCGGNQTTIGGITYDEDLYPAGPAVYKQSGKNWALSNTGHFMDNDTIPQGQFLPYTTENETRLDMTNAELYKNARVSPMSLTYYGFCLANGVYTVKLHFAEIMFTDDNTYSDLGRRVFDVYIQGERVLKDFNIANEAQGVGKELIKEFVAHVSGNDLEIRFYWAGKGTTYIPYKSVNGPLISALSVTYDSTGGFSVGLIVVIAVALMIVVILITVSVLRWRGLINCCHLDTCWHSLVEGLRSKSKFGRHFGGNEHLLMKGLRDIELLTGVFTLHQIKVATNNFDISNKIGEGGFGPVYKGILPNSKPIAVKQLSSNSDQGTREFINEIGMISALQHPNLVKLYGCCAEGDQLLLVYEYMENNSLAHALFDSEDSHLKLNWPTRKNICLGIARGLAFLHEESRLRVVHRDLKTSNVLLDEDLNPKISDFGLARLRVGDNTHISTRIAGTWGYMAPEYAMHGYLTEKADVFSFGVVISEIVSGKRNIIRQSKGEAFYLLDWARLLSERGNIMELVDPKLNLDVNEDEVRLIVKVALLCTHVTSSYRPCMSSVLSMLEGRTMVSEFDSHCSEVMDEMKLEVMREFYSQMDENKTSDTRSLSLTKGVPWTDSSSTATDLNLVQLDP*	951

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac5g01118	950	Gene3D	Transferase(Phosphotransferase) domain 1	687	901	-	-
	Phac5g01118	950	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	687	894	-	-
	Phac5g01118	950	SUPERFAMILY	L domain-like	19	281	-	-
	Phac5g01118	950	FunFam	Leucine-rich repeat receptor protein kinase EMS1	53	137	-	-
	Phac5g01118	950	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	733	745	IPR008271	GO:0004672\|GO:0006468
	Phac5g01118	950	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	323	517	-	-
	Phac5g01118	950	Gene3D	Ribonuclease Inhibitor	3	104	IPR032675	-
	Phac5g01118	950	SMART	serkin_6	611	882	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g01118	950	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	580	686	-	-
	Phac5g01118	950	Pfam	Protein kinase domain	613	821	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g01118	950	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	15	917	-	-
	Phac5g01118	950	Gene3D	Phosphorylase Kinase; domain 1	584	686	-	-
	Phac5g01118	950	ProSiteProfiles	Protein kinase domain profile.	611	888	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g01118	950	Gene3D	Ribonuclease Inhibitor	105	312	IPR032675	-
	Phac5g01118	950	CDD	STKc_IRAK	617	884	-	-
	Phac5g01118	950	Gene3D	-	321	518	-	-
	Phac5g01118	950	SUPERFAMILY	Protein kinase-like (PK-like)	595	892	IPR011009	-
	Phac5g01118	950	Pfam	Malectin domain	325	512	IPR021720	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac5g01118	Phac-Chr5	14883907	14892915	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac5g01118	13	942	Receptor kinase-like Gene Family	AT1G53420	49.734	0.0	892

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Phac5g01118		Pkinase	4.9e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac5g01118	-		-	vra:106779468	1645.56