Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01113 ATGTTCACTGATGATAACACATATAGCAGCGTAGGAAGACGCATATTTGATGTTTACGTTCAGGGAAAGCAAGAATTGAAGGATTTCAATATTGCAAATGAAGCAGGAGGAGTTGGGAAGAACATTACAAGAACAATTTCAACTATTGTGAGTAATAAGTCTTTAGAGATTCGTTTTTATTGGGCTGGAAAAGGAACAACTGATATCCCATATAAATCAGTATATGGCCCTCTTATATCAGCTATATCTGTCACTCGAGTAAACACTACTAACAGAGAGGATCCAAGTAAGACGGATCCAGGTAGCATGGCTATAGGGGCTGTAATTGGGATAACAGTTGCTGCAATTGTATTTGTCATCCTTATTGTACTTGGCTGGAGACTTCATACTGGGAAAAGAAATTCATTGGCAAAAGAGTTAAAGCATTTAAATTTGCAAATGGGTATGTTTACTATGCGTCAAATCAAAGTTGCAACAAACAACTTTGATATTTCCAATAAGATCGGAGAAGGAGGCTTCGGTCCTGTCTACAAGGGTACTTTATCAGATGGCACAATAATAGCAGTTAAGATGCTTTCATCAAAGTCAAAGCAAGGGAACCGTGAATTTATAAATGAGATAGGGTTGATTTCAGCTTTGCAACACCCTTGTCTTGTTAAACTTTATGGTTGTTGTGTTGAGGGAGATCAGTTGTTGCTGGTATACGAATATATGGAAAACAATAGCCTTGCACATGCTTTATTTAGAGATGGAGAATCTTGTTTGCAATTGGATTGGCCAACCAGGTATAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCTTTCCTACATGAAGAATCAAGATTAAAAGTTGTTCATAGGGACATAAAGGCTACTAATGTGTTGTTAGACAAAGACTTGAACCCAAAGATATCTGATTTTGGTCTTGCAAAGCTTGATGATGAGGACAATACTCACATAAGCACAAGAATAGCTGGAACTTATGGATATATGGCTCCAGAGTATGCCATGCATGGTTATTTAACTGATAAAGCAGATGTGTATAGTTTTGGAGTGGTTGCCTTAGAAATTGTGACTGGAAAGACCAATACCATCCATCGACCGAAGCAAGAAGCATTGCTTCTTTTAGATTGGGCACATTTAGTGAAAGAGAAAGGGAATCTGATGGAGCTAGTTGATAGAAGGTTAGGATCAAATTTCAATGAAAAAGAGGTAATGATGATGATAAAAGTGGGTCTTCTGTGCACAAATGCCACTGCAAACCTTAGGCCTAGCATGTCATCGGTGCTTAGCATGCTTGAAGGAAAAACTGTGATTCCAGAATTTATTTCAGATTCATCTGAAGTAATGGATGAAATGAAGCTAGAGGCTATGAGACAATATTACTCTCAAATGGAAGAAAATGAGAGAACTGAAACGCATACAAGTCATAGTTCATCAAAAGATGGGCCATGGACTGCTTCATCTTCATCTGCTGCAGACCTATATCCTGTCCATATTGATTCTTCTTATTGGGAGAAAAGAAATTAG 1530 0.3784 MFTDDNTYSSVGRRIFDVYVQGKQELKDFNIANEAGGVGKNITRTISTIVSNKSLEIRFYWAGKGTTDIPYKSVYGPLISAISVTRVNTTNREDPSKTDPGSMAIGAVIGITVAAIVFVILIVLGWRLHTGKRNSLAKELKHLNLQMGMFTMRQIKVATNNFDISNKIGEGGFGPVYKGTLSDGTIIAVKMLSSKSKQGNREFINEIGLISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLAHALFRDGESCLQLDWPTRYKICVGIARGLAFLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDDEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEIVTGKTNTIHRPKQEALLLLDWAHLVKEKGNLMELVDRRLGSNFNEKEVMMMIKVGLLCTNATANLRPSMSSVLSMLEGKTVIPEFISDSSEVMDEMKLEAMRQYYSQMEENERTETHTSHSSSKDGPWTASSSSAADLYPVHIDSSYWEKRN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01113 509 Gene3D Phosphorylase Kinase; domain 1 125 237 - -
Phac5g01113 509 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 131 237 - -
Phac5g01113 509 Gene3D Transferase(Phosphotransferase) domain 1 238 447 - -
Phac5g01113 509 Pfam Protein tyrosine and serine/threonine kinase 164 432 IPR001245 GO:0004672|GO:0006468
Phac5g01113 509 MobiDBLite consensus disorder prediction 465 490 - -
Phac5g01113 509 Pfam Malectin domain 9 82 IPR021720 -
Phac5g01113 509 SMART serkin_6 162 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01113 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Phac5g01113 509 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 471 - -
Phac5g01113 509 ProSiteProfiles Protein kinase domain profile. 162 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g01113 509 FunFam Putative LRR receptor-like serine/threonine-protein kinase 238 445 - -
Phac5g01113 509 SUPERFAMILY Protein kinase-like (PK-like) 146 436 IPR011009 -
Phac5g01113 509 CDD STKc_IRAK 168 435 - -
Phac5g01113 509 Gene3D - 2 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01113 Phac-Chr5 14809793 14815251 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01113 1 491 Receptor kinase-like Gene Family AT1G53430 60.594 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac5g01113 PK_Tyr_Ser-Thr 8.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01113 - - vum:124835551 869.381