LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac5g01109	ATGAAGCTTGTCAACATATCCATTCTTGGAAATCGGGTAACAGGTCCAATACCAAAAGAATTAGGAAACATCACCACACTGAAAAGTTTAGTCCTTGAGTTTAATCAATTATCTGGAGAGCTTCCTCCAGAGCTTGGAAATCTCCATCGACTTGAAAGATTGCTTCTTACATCCAACTATTTTACTGGAAATTTACCTGCAACATTTGCTAGACTCACTACACTAAAGCAAATTCGACTTGGCGACAATCAATTCTCTGGAACTTTACCTGATTTCATTCAGAGATGGACAAGTCTAGAGAGACTGGTGATGCAAGGGAGTGGTTTTAGTGGGCCAATTCCTTATGGAATTTCATTTTTGAACAACCTCACTGATTTGAGAATTAGTGACTTGAAAGGACCAGATTCTCAATTTCCCCAACTTAAAAACTTAACAATTTTGCAAACACTAGTACTGAGGAGTTGCAATCTTATAGGAATGGTTCCCGAATACCTTGGAAATGTGACTAGCTTACGATCATTAGATCTCAGCTTTAACAAATTAACTGGACCGATTCCAAAAACTTTGGGTGGCCTAAACGATATAAATATACTATATTTATCTGGAAACCTTTTCACTGGACCACTACCCAACTGGATAGATAGGCCAGACTATACTGATCTCTCATATAACAATTTGAGCATCGAAAATCCAGAGCAATTGACATGTCAACAGGGAAGCGTGAACTTGTTTGCATCTTCTTTGAAGGGAAATGACTTGGGAATGGTTCCATGTTTAGGCAACATTAACTGTCCTAAAACTTGGTACTCTCTCCATGTAAATTGTGGAGGGAAGTTAATATCTAATGTAAACATAAAATATGATGATGATTCACAAGAAGCTGGCCCAGCAAGATTTCGTCGAACAGGATCAAATTGGGTATTTAGCAACACTGGTCATTTCTTTGATAGTGGTCGTGTGGACTACTATACTTGGTCTAATACAACTAAGCTTCACATCAACAATGGCGAATTATATATGGATGCACGTGTTTCTCCCCTCTCTCTCACATATTATGCATTTTGCATGGGAAATGGAAGCTACACAATAAGCCTTCATTTTGCAGAAATAATGTTCACTGATGATCAAACATATAGCAGCTTGGGAAGACGTGTATTTGACATCTATGTTCAGAGAAAGTTGGTGCTGAAGGATTTCAATATTGCAAAAGAAGCAGGAGGAGTTAGTAAAGCAATCATAAAAAAGTTCACTGCTACAGTGAATAGCAGTACCTTAGAGATTCGCTTGCAGTGGGCTGGAAAAGGAACTACTGGTATACCATTTGGATCAGTTCATGGTCCTCTCATATCTGCTATATCTGTTGATCCTGATTTTACACCCCAAGAGGAAAATAAAGATGGTGTACCTATGCATTATATTGTTGCAATTATAGTTACTGGAGCACTTGTTATCATCATAATATTTGTCATAGGTTGGTGGAGAGGATGTTTAAGAAGAAAGGTATCGTTAGAAAAAGAATTAATGGGTTTAGATTTCCAAACTGGCTTATTTAGCTTAAGAAAAATCAAAGCTGCAACTAAAAACTTTGATATTAGCTTCAAGATTGGAGAAGGAGGTTTTGGTCCTGTATACAAGGGTGTTCTCTCAGATGGCACGGTAATAGCAGTTAAACAACTTTCTTCTAAATCAAAACAAGGGAATCGTGAGTTTATAAATGAGATTGGCATGATTTCTGCTTTGCAACACCCTTGTCTAGTTAAACTTTATGGTTGTTGTATGGAGGGAAATCAGTTGATGCTAATATATGAATACATGGAAAACAACAGTCTTGCTCGTGCTTTATTTGAACCAGAAAAATTTGAATTGAAGCTGAGTTGGTCAAGAAGGCAAAAGATATGTGTTGGTATTGCTAGAGGTTTGGCTTACCTCCATGGAGAGTCAAGGCTAAAGATAGTTCATAGGGACATCAAGGCCACTAATGTGCTACTAGACAAAGATCTCAATCCAAAGATATCTGATTTTGGTTTGGCCAAACTTGATGAAGACGGCTATACACACATAACTACCAGAGTAGCTGGCACTTATGGATACATGGCTCCAGAATATGCAATGCATGGTTATTTAACTGATAAAGCAGATGTGTATAGTTTTGGTATTGTGGCGCTGGAAATTGTTAGCGGAAAGAGTAATAGCATGAATTGGCCAAAGGAAGGATGTTTCTCTCTCGTTGATTTGGTGCATCTCTTGAAAGAACAAGGTGATCTAATGGACCTAGTTGATGAAAGGTTGGGTAAGGATTTCAAAAAAGATGAAGTAATAGTAATGATTAATGTGGCTCTATTATGTACACAAGTTTCTCCAATGCACAGACCCACCATGGCTTCAGTTGTATGCATGCTTGAAGGAAGAACTAATGTTCAAGAAGTGGTGTTAGATACAAGTGAAGTCTTGGATGGAAAGAAGTTGGAGATGCAACAATATTACAGTATAAGAGACAAAAATATAACTCAAGAAACTCAAGAAGAGAGCATCTCAATGAGTGAAACTTCAGCATTTATGTCTGATACAGATTTATATTCTATCAACATGGATTCTTCTTTCCAAGAGAAGAGTCAGTAG	2619	0.3757	MKLVNISILGNRVTGPIPKELGNITTLKSLVLEFNQLSGELPPELGNLHRLERLLLTSNYFTGNLPATFARLTTLKQIRLGDNQFSGTLPDFIQRWTSLERLVMQGSGFSGPIPYGISFLNNLTDLRISDLKGPDSQFPQLKNLTILQTLVLRSCNLIGMVPEYLGNVTSLRSLDLSFNKLTGPIPKTLGGLNDINILYLSGNLFTGPLPNWIDRPDYTDLSYNNLSIENPEQLTCQQGSVNLFASSLKGNDLGMVPCLGNINCPKTWYSLHVNCGGKLISNVNIKYDDDSQEAGPARFRRTGSNWVFSNTGHFFDSGRVDYYTWSNTTKLHINNGELYMDARVSPLSLTYYAFCMGNGSYTISLHFAEIMFTDDQTYSSLGRRVFDIYVQRKLVLKDFNIAKEAGGVSKAIIKKFTATVNSSTLEIRLQWAGKGTTGIPFGSVHGPLISAISVDPDFTPQEENKDGVPMHYIVAIIVTGALVIIIIFVIGWWRGCLRRKVSLEKELMGLDFQTGLFSLRKIKAATKNFDISFKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSKQGNREFINEIGMISALQHPCLVKLYGCCMEGNQLMLIYEYMENNSLARALFEPEKFELKLSWSRRQKICVGIARGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEDGYTHITTRVAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNSMNWPKEGCFSLVDLVHLLKEQGDLMDLVDERLGKDFKKDEVIVMINVALLCTQVSPMHRPTMASVVCMLEGRTNVQEVVLDTSEVLDGKKLEMQQYYSIRDKNITQETQEESISMSETSAFMSDTDLYSINMDSSFQEKSQ*	873

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac5g01109	872	Pfam	Malectin domain	270	452	IPR021720	-
	Phac5g01109	872	Gene3D	Transferase(Phosphotransferase) domain 1	605	820	-	-
	Phac5g01109	872	CDD	STKc_IRAK	535	802	-	-
	Phac5g01109	872	Gene3D	Phosphorylase Kinase; domain 1	497	604	-	-
	Phac5g01109	872	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	2	826	-	-
	Phac5g01109	872	Gene3D	-	268	456	-	-
	Phac5g01109	872	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	498	604	-	-
	Phac5g01109	872	SUPERFAMILY	L domain-like	3	228	-	-
	Phac5g01109	872	SMART	serkin_6	529	800	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g01109	872	Pfam	Leucine rich repeat	147	204	IPR001611	GO:0005515
	Phac5g01109	872	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	651	663	IPR008271	GO:0004672\|GO:0006468
	Phac5g01109	872	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	268	457	-	-
	Phac5g01109	872	ProSiteProfiles	Protein kinase domain profile.	529	810	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac5g01109	872	Pfam	Protein tyrosine and serine/threonine kinase	533	798	IPR001245	GO:0004672\|GO:0006468
	Phac5g01109	872	SUPERFAMILY	Protein kinase-like (PK-like)	513	801	IPR011009	-
	Phac5g01109	872	FunFam	Putative LRR receptor-like serine/threonine-protein kinase isoform A	65	132	-	-
	Phac5g01109	872	Gene3D	Ribonuclease Inhibitor	1	252	IPR032675	-
	Phac5g01109	872	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	138	230	-	-
	Phac5g01109	872	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	605	812	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac5g01109	Phac-Chr5	14603820	14624504	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac5g01109	1	851	Receptor kinase-like Gene Family	AT1G53420	54.239	0.0	920

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Phac5g01109		PK_Tyr_Ser-Thr	2.5e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac5g01109	-		-	gmx:100786496	1543.87