Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac5g01059 | ATGGCCGAGCTCACAGAACTGTTCCCATTGGGCCAACAATTCGATGGTTTGATACGCATGTGTGTGCATGCCATCTCTTATGATCTTCCAACTCTCATCACTGTTCTATTCGTACTCACATTGTTGTTCTTCATCCTACACCGAATTCTCAACGGGATGTTCTTCTGGGTAATGGAAATGGAGTCAAATGAACATGATCTTGAAGAAGGAAGCACTCATTTGGTAAACTACGGAGAGCCCTCTCAGCATGTTACCATCTTTCATGCTCTTGTGCACACTAATTTGCATGCTTGGACATTGGTGACTGCATTTGAAAGAGTTCATTCCAAAATAGGGCAAAATCTTAGAGCTTCCAAGAAATTACCCCCCTTGGTCAACTATGGAATGCATGGTAAAGCTAGAAATTGTGGGGAATGTGCCATTTGCTTGGAAGAATTCAGAGAGAATCAATTATGTCAAGTTTTTCCCGTGTGCAAACACCTTTTTCATTCGGATTGCATAGACCACTGGTTGCAGAAGAAATTAAACTGCCCTATATGTCGTGGTTCTGTATAG | 555 | 0.4198 | MAELTELFPLGQQFDGLIRMCVHAISYDLPTLITVLFVLTLLFFILHRILNGMFFWVMEMESNEHDLEEGSTHLVNYGEPSQHVTIFHALVHTNLHAWTLVTAFERVHSKIGQNLRASKKLPPLVNYGMHGKARNCGECAICLEEFRENQLCQVFPVCKHLFHSDCIDHWLQKKLNCPICRGSV* | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac5g01059 | 184 | CDD | RING-H2_PA-TM-RING | 138 | 181 | - | - | |
Phac5g01059 | 184 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 30 | 182 | IPR044675 | - | |
Phac5g01059 | 184 | SMART | ring_2 | 139 | 180 | IPR001841 | - | |
Phac5g01059 | 184 | Pfam | Ring finger domain | 138 | 181 | IPR001841 | - | |
Phac5g01059 | 184 | ProSiteProfiles | Zinc finger RING-type profile. | 139 | 181 | IPR001841 | - | |
Phac5g01059 | 184 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 103 | 184 | IPR013083 | - | |
Phac5g01059 | 184 | SUPERFAMILY | RING/U-box | 138 | 183 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac5g01059 | Phac-Chr5 | 12879206 | 12879760 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac5g01059 | 24 | 181 | C3H Transcription Factor Family | AT1G53010 | 32.317 | 1.51e-19 | 79.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac5g01059 | - | - | gmx:102660073 | 285.804 |