Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00998 ATGGCTGACGTGGCAGGTCTAGTTGAGGCAGCGGGATCAAGATTCACTTCATTGGAACTTATTGGGCAGGGATCGTTTGGAGACGTCTATAAAGCGTTTGACAAGGAACTCAACAGAGAAGTCGCCATCAAAGTAATCGACTTGGAAGAATCAGAGGATGAAATTGACGATATCCAGAAGGAAATTTCTGTTTTGTCCCAATGTCGATGTCCATACATTACTGAGTATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGTTCAGTTGCCGATCTACTCCAAGCAGGTCATCCCCTTGATGAAATGTCAATTGCTTGCATTCTACGTGACTTGCTGCATGCTGTTGATTATCTACACGCTGAAGGGAAAATTCACAGAGATATTAAAGCTGCAAACATTTTATTGTCTGAGAATGGTGATGTAAAGGTAGCAGATTTCGGTGTTTCTGCACAGTTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACGCCCTTTTGGATGGCGCCTGAGGTTATTCAGAATACTGATGGGTATAATGAGAAGGCAGATATTTGGTCTTTGGGAATCACTGCTATTGAGATGGCAAAGGGGGAGCCTCCACTTGCTGATCTTCACCCGATGAGAGTGCTTTTCATCATACCCCGGGAGAGTCCTCCACAGCTAGATGATCATTTTTCCCGTCCAATGAAAGAATTTGTCTCATTGTGCTTAAAGAAGGTTCCCGCTGAGAGGCCAAGTGCTAAGGAACTTTTGAAGGACCGTTTTATTCGGAATGCTAGGAGGAGTTCAAAGCTTGCAGAAAGAATAAGAGAACGTCCAAGATACCAAATAAAGGAAGAAGATCAGGAAACACCTAGAAATGTTTCAAGAGGGATGAGGGAGGCATCAGATACTGTAAAAGTGGCTAGAGATGTAAGAGGTGAAGAAAATAATCGACCCAGTGATCAGGGTAAAACCCTGAAAAGTGCTGGATGGGACTTCAATATTGGTGGATCACAGGGTACTGGAACCTTTCGTAGTGTGTCTCGACCACCTCAGTTTAGAGAGAAGAAAGCTGAAGGTTCACCTAATCAGCTAACCCAAAGAAAAGCTCCAGAGAGTGGTTATCAAGGGGGATCTGCCAATCGAAGTGCACTCAATGAGTCACTTGAAAGTTCCTCTGGAAGAGATCTTAGAGTTCCCCACCACGATGAGCATCTGGACATTGAAGATGATGAATTATCTGGAAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGGTCAAGGTCATCAGTATTCTGTGACCAGAGCCCTCAATATAGTAGCAGCTATTCTTCTTTTGATGATGCTTCTACAAGTGGGACTGTTGTTTTACGTGGCCAGCATGATGAGTCTGGTTCTCCACAGCCACTAAGGTCTCGACTGGGACTGAATGACAGAAATTCAAATTCCTCAATGGAAGACAGTGCGGCAAATCTTGCTGAGGCAAAGGCTGCTTTGCAAGGAGGGCTCAGGAGAGTGAGTTCTCGAGAAAGATTGGCCTGGGGAAAAAACAACAATGAAAGACAGGAAGACAAGAAAGATGGAAAGGGCAGCAGCTCTGATTCTTCAAGACTAAGTGTCGAACGTGACTCACACAGGGGCATGTCAAGATCACATCATGCTAATAATGAAGGAAGTGCTAAAATAATGTCATCCTCAGTGCCATTATCTGCTTTACTTATTCCTTCATTAAAAGAGGTCATTTCTGATGATCCAGAAGGGTCAGTTGTGCGGGCAGTTATCAATTCTTTTATAAACATGGAGGGCTCAAAACCTAAATCCTGTGATGCTTTTCTCAAACAGTTGCTTCAGCGATTGGCAAGTTCGAAGGAAGATTCACTGAAGGACCTGCAGGGACTAGCAGGCCAACTATTCAGCAAGACCAAGTCCACCGAAGAAACCCGAAATGCAGAGGCTGATAACAGGAAAAAACAACAAAACAAGGAACATCATCCTAATAGCAATTTAAGTCCACTAGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCACGGGATCTCAACTCATCTTGA 2097 0.4344 MADVAGLVEAAGSRFTSLELIGQGSFGDVYKAFDKELNREVAIKVIDLEESEDEIDDIQKEISVLSQCRCPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQAGHPLDEMSIACILRDLLHAVDYLHAEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRESPPQLDDHFSRPMKEFVSLCLKKVPAERPSAKELLKDRFIRNARRSSKLAERIRERPRYQIKEEDQETPRNVSRGMREASDTVKVARDVRGEENNRPSDQGKTLKSAGWDFNIGGSQGTGTFRSVSRPPQFREKKAEGSPNQLTQRKAPESGYQGGSANRSALNESLESSSGRDLRVPHHDEHLDIEDDELSGNGSGTVVIRSPKGSRSSVFCDQSPQYSSSYSSFDDASTSGTVVLRGQHDESGSPQPLRSRLGLNDRNSNSSMEDSAANLAEAKAALQGGLRRVSSRERLAWGKNNNERQEDKKDGKGSSSDSSRLSVERDSHRGMSRSHHANNEGSAKIMSSSVPLSALLIPSLKEVISDDPEGSVVRAVINSFINMEGSKPKSCDAFLKQLLQRLASSKEDSLKDLQGLAGQLFSKTKSTEETRNAEADNRKKQQNKEHHPNSNLSPLARFLLSRWQGQTSRDLNSS* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00998 698 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00998 698 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00998 698 MobiDBLite consensus disorder prediction 279 301 - -
Phac5g00998 698 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Phac5g00998 698 MobiDBLite consensus disorder prediction 651 670 - -
Phac5g00998 698 MobiDBLite consensus disorder prediction 279 495 - -
Phac5g00998 698 Gene3D Transferase(Phosphotransferase) domain 1 12 304 - -
Phac5g00998 698 MobiDBLite consensus disorder prediction 364 398 - -
Phac5g00998 698 SUPERFAMILY Protein kinase-like (PK-like) 12 289 IPR011009 -
Phac5g00998 698 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00998 698 MobiDBLite consensus disorder prediction 307 326 - -
Phac5g00998 698 MobiDBLite consensus disorder prediction 516 567 - -
Phac5g00998 698 Coils Coil 649 669 - -
Phac5g00998 698 MobiDBLite consensus disorder prediction 645 680 - -
Phac5g00998 698 MobiDBLite consensus disorder prediction 516 559 - -
Phac5g00998 698 Coils Coil 41 68 - -
Phac5g00998 698 CDD STKc_MST3_like 13 287 - -
Phac5g00998 698 MobiDBLite consensus disorder prediction 399 417 - -
Phac5g00998 698 MobiDBLite consensus disorder prediction 423 495 - -
Phac5g00998 698 FunFam serine/threonine-protein kinase dst1 isoform X1 12 301 - -
Phac5g00998 698 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 11 647 - -
Phac5g00998 698 MobiDBLite consensus disorder prediction 337 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00998 Phac-Chr5 11601736 11613496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00998 1 695 MAP Kinase Kinase Kinase Kinase AT3G15220 64.765 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Phac5g00998 Pkinase 8.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00998 K08838 - gmx:100815042 1140.95