Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00996 ATGGACTCCTCCTACCACCACTTGGACCACACTGAAGCTCACCTGCCACCTGGATTTAGGTTCCACCCCACTGACGAGGAGCTCATAACGTACTACCTTCTCAAAAAGGTTTTAGACAGCACCTTCACTGGTAGAGCCATAGCTGAAGTAGACCTGAACAAGAGTGAACCATGGGAGCTCCCAGAGAAAGCTAAAATGGGTGAGAAAGAGTGGTACTTCTTCAGCTTACGTGACAGGAAGTACCCAACTGGGTTACGAACCAATAGGGCTACTGAAGCTGGTTACTGGAAAGCTACTGGGAAAGATAGAGAGATTTACAGCTCCAAGACCTCTTCTTTGGTCGGGATGAAGAAAACCTTGGTTTTCTACCGTGGTCGAGCTCCCAAGGGGGAGAAAAGTAACTGGGTCATGCATGAGTATCGCCTTGAAGGCAAATTTGCTTACCACTACCTTTCTCGCAACTCCAAGGATGAGTGGGTCATATCGCGCGTGTTCCAAAAGAGCAACACATCCAACGGCGGTTCCGCCATGTCTGCTTCAAGTGGCTCCAAGAAAACTAGAATGAATACCACCAACAGCTCTCTCTGCCCAGAACCAAGTTCTCCCTCTTCAGTCTACCTTCCGCCTCTTCTAGACTCTTCACCGTACGCCAACACAACCACCGCAGTCAACTTCACTGGCCGTAACAACTGTTCCTATGACAGCACCACCAAAAAGGAGCACGTGTCCTGTTTCTCCACAATCGCTGCAGCCACCGCTGCTGTTGTCTCCCCAAACAACTTCACCAATGCAAGCTTCGACCTTCCACCATCTCAGCCTCTTGGGACGGATCCCTTCGCTAGGTTTCAGAGAAACGTTGGCGTATCTGCCTTCCCAAGTTTGAGGTCACTGCAAGACAACCTCCAGTTACCGTTCTTTTTTCCTCCAGCAGCACAGCCCTTCTCCGGCGGTGGCTCCGGTGATCTCCTCTGGTCGATGCCGGAGGAGCAAAGGCTGGTTGATGCGGCATCCAACGTTCCACTGGGGGTGTCGGAGCTTGATTGTATGTGGGGATACTAG 1059 0.5127 MDSSYHHLDHTEAHLPPGFRFHPTDEELITYYLLKKVLDSTFTGRAIAEVDLNKSEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTSSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRNSKDEWVISRVFQKSNTSNGGSAMSASSGSKKTRMNTTNSSLCPEPSSPSSVYLPPLLDSSPYANTTTAVNFTGRNNCSYDSTTKKEHVSCFSTIAAATAAVVSPNNFTNASFDLPPSQPLGTDPFARFQRNVGVSAFPSLRSLQDNLQLPFFFPPAAQPFSGGGSGDLLWSMPEEQRLVDAASNVPLGVSELDCMWGY* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00996 352 FunFam NAC domain-containing protein 100-like 24 171 - -
Phac5g00996 352 MobiDBLite consensus disorder prediction 170 201 - -
Phac5g00996 352 SUPERFAMILY NAC domain 11 167 IPR036093 GO:0003677|GO:0006355
Phac5g00996 352 ProSiteProfiles NAC domain profile. 15 167 IPR003441 GO:0003677|GO:0006355
Phac5g00996 352 MobiDBLite consensus disorder prediction 170 203 - -
Phac5g00996 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 221 - -
Phac5g00996 352 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Phac5g00996 352 Gene3D NAC domain 24 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00996 Phac-Chr5 11530046 11533029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00996 1 352 NAC Transcription Factor Family AT5G53950 52.941 5.93e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac5g00996 NAM 1.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00996 - - vun:114185732 630.557