Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00968 ATGATAATTACATTTGTAGCAAAGGATTTTTGGACTGCTCAGAAGAAAGTGTCAGAGTTGATCAACGGAAGGATCCTTGTTGGTCATGCCTTGTCCAATGACCTTAAGGCATTGTTATTAAGTCATCCCAAAAAGGAAATAAGAGATACCTCCGAGTATCAACCATTTCTAAGATCAAATGGCAGAAGAGCACTGCGACATCTTGCTGCCGAACATCTTGGTGTGACGATCCAAACAGGAGAGCACTGCCCAATAGAAGATGCTCGTGCTGCTATGCTGCTTTACCAAAGAAATAAGAAGGAATGGGAGAAGAGCATAAAAGATCAATTTCGGTTCAATCAGAAGCAAAGGAAATTGAAGCAGAAAAAGAAGCAGAAGATTGAAGATGCTTCAAATGCAAACCATGTTGAAATTGGATCATAG 423 0.4019 MIITFVAKDFWTAQKKVSELINGRILVGHALSNDLKALLLSHPKKEIRDTSEYQPFLRSNGRRALRHLAAEHLGVTIQTGEHCPIEDARAAMLLYQRNKKEWEKSIKDQFRFNQKQRKLKQKKKQKIEDASNANHVEIGS* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00968 140 Coils Coil 85 105 - -
Phac5g00968 140 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 12 120 IPR047021 GO:0004527
Phac5g00968 140 MobiDBLite consensus disorder prediction 113 140 - -
Phac5g00968 140 Coils Coil 113 133 - -
Phac5g00968 140 Gene3D - 5 124 IPR036397 GO:0003676
Phac5g00968 140 SUPERFAMILY Ribonuclease H-like 7 104 IPR012337 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00968 13 97 C2H2 Transcription Factor Family AT5G40310 41.000 1.18e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00968 K18327 - gmx:100811497 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g00968 5 11064841 11074287 Phac5g00968 5 11064841 11074287 ECH