Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00960 ATGGCACAGTTACCTCCCAAAATACCAACCATACCCCAAAATTGGCCATCTTTTCCTCACCAAAGGGTGCCAACAATGGCCAACTTCACCCCTACAACCTCATCCACCACCACCTCCACCTCCACCGCCGCCGCCACCACCACTCCCTCCCAACCCTCTTGGGTCGACGAATTCCTCGACTTCTCCTTGACCCGGCGGGGGGCTCACCGGCGATCCGCCAGTGACTCCATTGCCTTCCTGGAGACGCCGTTTCTCGAGGAATGTCGAGCCGGTTTCGACCGACTCGACGAGGACCAGCTGATTTCTATGTTCTCTGACGACATTGCCGCAGCGGCACTCCCGCCTCCGCCGCTTTCATCGGCGTCCAACCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGAGGAGAAGCCCATGGCAATGGCGTTGGACGTGAAGCCGAAGACCGAATCGGTTGAAGAGGAGAGCTCGTGCAAGAATGAGGCGGCGGCGCTGCAACTCTCCGCCACTGCCACCTGCGCTGAAACCGTTGTCGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACAGGCAATCAGCACAGAGATCAAGGGTAAGAAAGCTACAGTACATCTCTGAGCTTGAAAGGAGCGTAACAACCTTACAGACGGAGGTATCAGCATTGTCACCACGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGTATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGGTATAATGCTGTTCTTTTTCCTTTTCCAAATATTTTCACTTCATCTTTCATATATATGTTATGGTGAAAGATTATTTTTCTGGCAAATGTGA 867 0.519 MAQLPPKIPTIPQNWPSFPHQRVPTMANFTPTTSSTTTSTSTAAATTTPSQPSWVDEFLDFSLTRRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDIAAAALPPPPLSSASNPSSPSSDQNSNNEEKPMAMALDVKPKTESVEEESSCKNEAAALQLSATATCAETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDGIMLFFFLFQIFSLHLSYICYGERLFFWQM* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00960 288 Gene3D - 181 253 - -
Phac5g00960 288 SMART brlzneu 178 242 IPR004827 GO:0003700|GO:0006355
Phac5g00960 288 MobiDBLite consensus disorder prediction 112 136 - -
Phac5g00960 288 SUPERFAMILY Leucine zipper domain 182 236 IPR046347 GO:0003700|GO:0006355
Phac5g00960 288 Pfam bZIP transcription factor 182 226 IPR004827 GO:0003700|GO:0006355
Phac5g00960 288 CDD bZIP_plant_RF2 183 233 IPR044759 GO:0003700|GO:0006355
Phac5g00960 288 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 185 200 IPR004827 GO:0003700|GO:0006355
Phac5g00960 288 PANTHER BASIC LEUCINE ZIPPER 34 1 259 - -
Phac5g00960 288 MobiDBLite consensus disorder prediction 30 51 - -
Phac5g00960 288 FunFam Basic leucine zipper 61 181 254 - -
Phac5g00960 288 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 232 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00960 Phac-Chr5 10936796 10941032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00960 1 263 bZIP Transcription Factor Family AT3G58120 53.872 2.71e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac5g00960 bZIP_1 7.4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00960 - - gmx:100820197 380.563