Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00959 ATGGCACAGTTACCTCCCAAAATACCAACCATACCCCAAAATTGGCCATCTTTTCCTCACCAAAGGGTGCCAACAATGGCCAACTTCACCCCTACAACCTCATCCACCACCACCTCCACCTCCACCGCCGCCGCCACCACCACTCCCTCCCAACCCTCTTGGGTCGACGAATTCCTCGACTTCTCCTTGACCCGGCGGGGGGCTCACCGGCGATCCGCCAGTGACTCCATTGCCTTCCTGGAGACGCCGTTTCTCGAGGAATGTCGAGCCGGTTTCGACCGACTCGACGAGGACCAGCTGATTTCTATGTTCTCTGACGACATTGCCGCAGCGGCACTCCCGCCTCCGCCGCTTTCATCGGCGTCCAACCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGAGGAGAAGCCCATGGCAATGGCGTTGGACGTGAAGCCGAAGACCGAATCGGTTGAAGAGGAGAGCTCGTGCAAGAATGAGGCGGCGGCGCTGCAACTCTCCGCCACTGCCACCTGCGCTGAAACCGTTGTCGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACAGGCAATCAGCACAGAGATCAAGGGTAAGAAAGCTACAGTACATCTCTGAGCTTGAAAGGAGCGTAACAACCTTACAGACGGAGGTATCAGCATTGTCACCACGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGTATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCATCAAGAGGCATTAAAGAAGGAAATAGAGAGATTGAGGCAAATCTACCACCAACAGAACCTGCAGAAGATGAGTAACACAGTGAACAACAATCTTCAAACGGCACCAACATCACAGCCACAAGCTCCTATGCAATCACATTCCCTTCATCAGCATCAGCATCAGCATCAGATGACAGTGTCTCAACCATTGGGATGCAAGGACAAGGAGCAGCTCCTGAGTTGA 1002 0.5269 MAQLPPKIPTIPQNWPSFPHQRVPTMANFTPTTSSTTTSTSTAAATTTPSQPSWVDEFLDFSLTRRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDIAAAALPPPPLSSASNPSSPSSDQNSNNEEKPMAMALDVKPKTESVEEESSCKNEAAALQLSATATCAETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMSNTVNNNLQTAPTSQPQAPMQSHSLHQHQHQHQMTVSQPLGCKDKEQLLS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00959 333 SUPERFAMILY Leucine zipper domain 182 236 IPR046347 GO:0003700|GO:0006355
Phac5g00959 333 CDD bZIP_plant_RF2 183 233 IPR044759 GO:0003700|GO:0006355
Phac5g00959 333 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 185 200 IPR004827 GO:0003700|GO:0006355
Phac5g00959 333 MobiDBLite consensus disorder prediction 30 51 - -
Phac5g00959 333 FunFam Basic leucine zipper 61 181 254 - -
Phac5g00959 333 SMART brlzneu 178 242 IPR004827 GO:0003700|GO:0006355
Phac5g00959 333 MobiDBLite consensus disorder prediction 112 136 - -
Phac5g00959 333 PANTHER BASIC LEUCINE ZIPPER 34 1 304 - -
Phac5g00959 333 MobiDBLite consensus disorder prediction 289 323 - -
Phac5g00959 333 MobiDBLite consensus disorder prediction 289 333 - -
Phac5g00959 333 Coils Coil 261 281 - -
Phac5g00959 333 Pfam bZIP transcription factor 182 226 IPR004827 GO:0003700|GO:0006355
Phac5g00959 333 Gene3D - 181 280 - -
Phac5g00959 333 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 232 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00959 Phac-Chr5 10936796 10941032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00959 1 260 bZIP Transcription Factor Family AT3G58120 53.401 7.77e-84 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac5g00959 bZIP_1 8.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00959 - - gmx:100820197 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g00959 5 10936796 10941032 Phac5g00959 5 10936796 10941032 ECH