Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00943 ATGGTGAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGAGATAGTGGAAGTTGAAGGGGGACACATTGTGAGGTCCACGGGGCGGAAGGACCGTCACAGCAAAGTGTGCACCGCCAAAGGACCGCGTGACCGGCGGGTGAGGCTGTCGGCCCACACCGCAATTCAATTCTACGACGTGCAGGATCGGTTGGGCTACGACCGGCCCAGTAAGGCTGTGGACTGGCTCATCAACAAGGCCAAGGCCGCCATCGATCAACTCGCGCATCTCCCTCCCTGGAAACCAACCCTCCCAACAACAAACTACCTAAACGACGACGAATCAGACAAAACAAACCCTAATAACCCAAACTCAACCGCAAACGCCAACACAAACCCTGATGCTGAAATTCTGAACCAGTTCAACGAGAACCTTGAGAACGATGGTGGTGGAGGAGGAGCAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGCTCGAGTTATCTTCCGTTGGATAACGACACGATAAGATCGTTCTTCCCCATTACGACGTCGTCGTTGATTCAGTTCCAGAGCTACCCACCGGATTTGCTTTCGAGGACGAGCAGCCAGGATTTGCGTCTCTCGCTTCAGTCCTTGCAGGACCCGATTATGCTCCACCATAACCAAAACGAGCCCGTGCTTTTCGCTGGAGCCGGGTTTGATAACATGGTAGCGTGGAACAACAGTGGTAATGCTAATAATGATACTCATGGTGGTGGAGGTGGAGGAGGGTTTGTGCTTAACGCTCCCTCGCCTTTGCCCGGGCCGGCGACGGTGGCGTCGCCGGCGGTGGTTTTTGGCTATGGTAATGGTAATGGTCAAGGCCAGTATTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCGTCCGTTCGTGCGTGGATTGACGCGCCGTCGTTTGTGGCCGCCGCCGATCATTATCATCGGCATCACTATCTGTCACCTGCGGCGGCCGCGGCGGCGTTGGTGTATCAATCATCTCCTTCTTCGGCATTTGCGCCCGGGGGCTTCTCGGGATTCCGCGTGCCGGCACGAATTCAGGGTGAGGAGGAGCACGACGGCGTGTCCGATAAGCCGTCCTCTGCTTCCTCCGATTCTCGCCGCTGA 1134 0.5688 MVRGGGGGGGGGGGEIVEVEGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKAAIDQLAHLPPWKPTLPTTNYLNDDESDKTNPNNPNSTANANTNPDAEILNQFNENLENDGGGGGAGGGGEGGGGGGSSYLPLDNDTIRSFFPITTSSLIQFQSYPPDLLSRTSSQDLRLSLQSLQDPIMLHHNQNEPVLFAGAGFDNMVAWNNSGNANNDTHGGGGGGGFVLNAPSPLPGPATVASPAVVFGYGNGNGQGQYFSQRGPLQSSNTPSVRAWIDAPSFVAAADHYHRHHYLSPAAAAAALVYQSSPSSAFAPGGFSGFRVPARIQGEEEHDGVSDKPSSASSDSRR* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00943 377 Pfam TCP family transcription factor 29 113 IPR017887 -
Phac5g00943 377 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 293 IPR005333 GO:0003700
Phac5g00943 377 MobiDBLite consensus disorder prediction 354 377 - -
Phac5g00943 377 MobiDBLite consensus disorder prediction 92 162 - -
Phac5g00943 377 ProSiteProfiles TCP domain profile. 30 88 IPR017887 -
Phac5g00943 377 MobiDBLite consensus disorder prediction 352 377 - -
Phac5g00943 377 MobiDBLite consensus disorder prediction 98 140 - -
Phac5g00943 377 MobiDBLite consensus disorder prediction 24 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00943 Phac-Chr5 10722125 10723258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00943 3 376 TCP Transcription Factor Family AT3G15030 47.100 1.87e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac5g00943 TCP 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00943 - - vum:124829805 568.926