Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00939 ATGATTAACAATGGAGTCTGCACTCTCCGCACCTGCTTCCGTTTCCCGGAGAGGTCGCTATTCCGACCACGGCAGTGCTCGTTCACTTCCCGGCGACGGTTTCTGGTGACTGCATCCGAAAGGAAGAAGAAAGAGAAGGTGATTGTGATTTCTGGACCCACCGGTTCGGGCAAGAGCCGCCTGGCATTGGAACTAGCTAAGCGCCTAAACGGCGAAATCGTCAGTGCTGATTCCGTTCAGGTGTATCGGGGGCTTGATGTTGGATCTGCAAAGCCTTCCCCAGATGAAAGAAAGGAGGTACCGCATCATCTGGTTGACATACTGCACCCATCTGAAGACTATTCTGTTGGGCAGTTTTTTGAGGATGCAAGGCATGCTACAAGATGTATTCTTGACAATGGCCGTGTTCCCATAGTTGTTGGAGGCACTGGATTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTACCTAAAGCTTCTCCAGAGATTATATCTGAAGTAAATCAAGAATTAGCTGAACTACAGAGGAGAGATGACTGGGATACAGCTGTACAGTTGGTGGTAAAAGCAGGTGATCCAAAGGCTCAATTTTTAGCAGTGAATGATTGGTATCGATTACGGCGTAGCCTAGAGATTATTAAGTCTAGTGGATCACCTCCTTCTGCGTTTCGGGTACCATATGATTCTTTCAGGGAACAGAGTGAATGTAGCGTTGCTGAGGTTTCGGAGTCATCTTATATGAACACTGGAATGGAAGAAACCAGCTCATCAGAGTTAGACTATGAGTTTATGTGCTTTTTCCTTTCTAGTCATAGACTTGACCTCTATAAATCAATTGATTATCGGTGTGAAGATATGCTTTTAGGAAGGGATGGGATTTTGTCCGAGGCTCAGTGGCTTCTTGATACCGGTCTTCATCCAAACTCCAATTCTGCAACTAAAGCAATTGGTTACAGACAAGCCATGGAGTACTTACAAAGATGCAGAGAGCACGGGGGTCAGAGTTCTGTTGCAGAATTTTACAAATTCTTGTTTGAATTTCAAAAAGCATCACGGTAA 1062 0.4492 MINNGVCTLRTCFRFPERSLFRPRQCSFTSRRRFLVTASERKKKEKVIVISGPTGSGKSRLALELAKRLNGEIVSADSVQVYRGLDVGSAKPSPDERKEVPHHLVDILHPSEDYSVGQFFEDARHATRCILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASPEIISEVNQELAELQRRDDWDTAVQLVVKAGDPKAQFLAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREQSECSVAEVSESSYMNTGMEETSSSELDYEFMCFFLSSHRLDLYKSIDYRCEDMLLGRDGILSEAQWLLDTGLHPNSNSATKAIGYRQAMEYLQRCREHGGQSSVAEFYKFLFEFQKASR* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00939 353 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 44 329 IPR039657 -
Phac5g00939 353 Gene3D - 44 353 IPR027417 -
Phac5g00939 353 Pfam IPP transferase 80 328 - -
Phac5g00939 353 FunFam tRNA dimethylallyltransferase 9 155 226 - -
Phac5g00939 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 176 IPR027417 -
Phac5g00939 353 Gene3D - 155 226 - -
Phac5g00939 353 Hamap tRNA dimethylallyltransferase [miaA]. 47 353 IPR018022 GO:0008033
Phac5g00939 353 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 47 224 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00939 Phac-Chr5 10546962 10553536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00939 50 224 C2H2 Transcription Factor Family AT2G27760 30.055 2.02e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00939 K00791 - gmx:100808814 625.935