Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00937 ATGATTAACAATGGAGTCTGCACTCTCCGCACCTGCTTCCGTTTCCCGGAGAGGTCGCTATTCCGACCACGGCAGTGCTCGTTCACTTCCCGGCGACGGTTTCTGGTGACTGCATCCGAAAGGAAGAAGAAAGAGAAGGTGATTGTGATTTCTGGACCCACCGGTTCGGGCAAGAGCCGCCTGGCATTGGAACTAGCTAAGCGCCTAAACGGCGAAATCGTCAGTGCTGATTCCGTTCAGGTGTATCGGGGGCTTGATGTTGGATCTGCAAAGCCTTCCCCAGATGAAAGAAAGGAGGTACCGCATCATCTGGTTGACATACTGCACCCATCTGAAGACTATTCTGTTGGGCAGTTTTTTGAGGATGCAAGGCATGCTACAAGATGTATTCTTGACAATGGCCGTGTTCCCATAGTTGTTGGAGGCACTGGATTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTACCTAAAGCTTCTCCAGAGATTATATCTGAAGTAAATCAAGAATTAGCTGAACTACAGAGGAGAGATGACTGGGATACAGCTGTACAGTTGGTGGTAAAAGCAGGTGATCCAAAGGCTCAATTTTTAGCAGTGAATGATTGGTATCGATTACGGCGTAGCCTAGAGATTATTAAGTCTAGTGGATCACCTCCTTCTGCGTTTCGGGTACCATATGATTCTTTCAGGGAACAGAGTGAATGTAGCGTTGCTGAGGTTTCGGAGTCATCTTATATGAACACTGGAATGGAAGAAACCAGCTCATCAGAGTTAGACTATGAGTTTATGTGCTTTTTCCTTTCTAGTCATAGACTTGACCTCTATAAATCAATTGATTATCGGTGTGAAGATATGCTTTTAGGAAGGGATGGGATTTTGTCCGAGGCTCAGTGGCTTCTTGATACCGGTCTTCATCCAAACTCCAATTCTGCAACTAAAGCAATTGGTTACAGACAAGCCATGGAGTACTTACAAAGATGCAGAGAGCACGGGGGTCAGAGTTCTGTTGCAGAATTTTACAAATTCTTGTTTGAATTTCAAAAAGCATCACGGAATTCTAGAGAAAGAAGAAAAGAAAAGTGCAACTATGATAAGTTATTCTCCAGCTACCATGAAAACTGCTACTGTGTTTTCTCTTGCCAATGA 1152 0.4418 MINNGVCTLRTCFRFPERSLFRPRQCSFTSRRRFLVTASERKKKEKVIVISGPTGSGKSRLALELAKRLNGEIVSADSVQVYRGLDVGSAKPSPDERKEVPHHLVDILHPSEDYSVGQFFEDARHATRCILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASPEIISEVNQELAELQRRDDWDTAVQLVVKAGDPKAQFLAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREQSECSVAEVSESSYMNTGMEETSSSELDYEFMCFFLSSHRLDLYKSIDYRCEDMLLGRDGILSEAQWLLDTGLHPNSNSATKAIGYRQAMEYLQRCREHGGQSSVAEFYKFLFEFQKASRNSRERRKEKCNYDKLFSSYHENCYCVFSCQ* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00937 383 Gene3D - 44 371 IPR027417 -
Phac5g00937 383 Hamap tRNA dimethylallyltransferase [miaA]. 47 377 IPR018022 GO:0008033
Phac5g00937 383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 176 IPR027417 -
Phac5g00937 383 FunFam tRNA dimethylallyltransferase 9 155 226 - -
Phac5g00937 383 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 47 224 IPR018022 GO:0008033
Phac5g00937 383 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 44 363 IPR039657 -
Phac5g00937 383 Gene3D - 155 226 - -
Phac5g00937 383 Pfam IPP transferase 80 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00937 Phac-Chr5 10546962 10553536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00937 50 224 C2H2 Transcription Factor Family AT2G27760 30.055 2.68e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00937 K00791 - gmx:100808814 629.787