Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00931 ATGTTGATCAGCAACGAGGTAGGGGATTTGTTTGATGATAACTTTGAAGGATCTAACGAAGAAAGACAGATTTTTTCAGAGGTCTTTTCTGGTAATGACATTTTTCAGTCTACTCAGAAATGTCTTGTTCCTGGAGTTATCAGCTTTGAACATGAATCTGCTAAAAACACATTTAAATCATTCTGCTCTAGTAACGAAAACTCAGTTGCATTGCATCCCTCGTCTTCTAGACTTACACACCCTGAAGAGGAGAACTTTAATGTAATTCAGCATTCCAAAGAGGCTGCTCCGGGATGTGTGCCAGAGAGTTTGATTTGTGAAGACCAGAATGATGAGGATGTGAATGTCAAACGAATGAAATTTTCTCTGCATGAACTTGCTTGTAGTAGATCTGATTCAGAAAAAAATATGAGTTCATCACGACTTTCAAAAGTAGCAGTTTCTAACCTGTCTTCTGCTGCTACAGGCTGTAATAGTGAACCAATTGCATTTCGGTTGGTTGAATCATCCAAAGATGGTGTGATATCCAGTTGTTATCTATTGAACCATAACAATTTAAATAAACAAGCTGTTAAGGATGATGTAGATGTTACAAATTTTAACACAGCAACAGCAGACAGACATATTGCAAAAGAAGTGTCTGTAAGTAAAGCAGCTGCTTCTCCTGTTTCCCAGGAAAGCTTTGCGAGCAGGCTTGTAATTACAAGTCCGTCAATCACTGTTAAGAAGGCTGGGTCTCCTTTAAATCCTGAGGAAATGCCGGAATCTACTAATGGGGACATTTCAAATTCACCCTCAATGCTACAGGAAGAGGACCCTCGTACTATTCTGCAGTTTCAGATTGTTCAGTTGCTTACGATGGCAGGGTGGACTATTGAGAAGCGTCAACGGCCTAGCAGACGTTATCCAGAGTCAGTTTACAGGACACCAGAGGGAAAGCCTATTCGGGAATTTACTAAGGCTTGGAGAATATGTGGTGAGCTATTGTCTGTTGAAAAATGCAATTTAATGTGCAGAGATTATAAGGAATGGACTGATATTAGTCAATTCTGGTCTGATCTATCCAGTGCACTGATAAATGTTGAAAAAACAAAGATGCAGTCAGAAGACCCTGATGCTATGTTGGCTTATCGATGGTGGCTTTTGGATCCGTTTGTAGTTGTTATATTTGTTGATAGAAAGATTGGTGCCCTGAAAAAGGGAGAGGTAGTGAAAGCAACTTGGACTTTAGTTTCTAGTAAGTATAAGGTGGCATGTGCTCCCATTGATTCGAGCTCTGGAAATTCGAATCAGGTACCTGGAGGGTCTAATTTAAATGCTGTTCACGAAGCCAAAATTAGAAGTTCTAGAAGTCTTGATAAGCAGAGTTCAGATGGACATGTGCCAATGGACATGTCCGAAGAAAATAACGCATCCGGTGTGAGCTATGGCCTGGTTCATTCTCACGGCTCAAGGACTATGCAACAGTCTGAATGTAGTGAGGAAGAGGGCGGGAAAATCTTAGTAGATTCTGCATTTGGGAAAGATAGCACATATTCTGTTTCTAATGTTATTCTTAGAAAGAAAATGCGAAGGAAGTGCAAAAGGGTATCTGAAATTAAAATGAGTATGTTCTGCCATGGTGACATGCTGGGCTCAACTGTCACTGATCAGGTGCAGTCACTAGATGGTGAAGCATGTGGTTTGGAAGAGGTCCAGAATTATCTAGTTGACAATGCTGGAAAGAAAAGAAGCTGCAGAAAGTTATCATCTTTCAGTGCAATTCAGAGAAATACCAGGAAAACAAACGGCTCCATAACTGGAACGGATAGGTCTAACAGATGCCATATTAAAGATGATGATTTATTGGTGTCTGCAATATTCAGGAATAAGGACTTCGGCCCAAAGGCTATCCGGGGAAGTTCTAGAGCTAAATCCTGCAAATCAAGGGGCCAGAGAAAGCTTAAAAGCCAAAAGGGTCGTTGCAGGTTGCTGCCAAGGAACCCCTGTAGTGCAGGGAAGTACAATAAGGACTGTAATAGGTCTTATTTGGGTTCAAGGACAATACTGTCCTGGTTAATTGATAATGGGGTCATATCTTTAAATGATGTGATTCAATACCGAAATACTAAGGATAATGTTGTCATTAAGGATGGCAGGATCACCAAAGATGGTATTATATGTATATGTTGTGGTAAGGTGCTTACATTATCTGAGTTCAAGTTGCATGCTGGGTTTACATTGAATCGCCCCTGCGTAAATATTTTTATGGAGTCTGGCGAGCCCTTTACATTGTGCCTCCTTCAAGCTTGGTCAGCTGAATACAAAGCCAGGAAAAGTCTGAATCTGGTTGTGCAGACTGATGATAATGACAAAAATGATGATTCATGCGGGTTGTGTGGTGAAGGGGGTGAGCTGATATGTTGTGATAATTGTCCATCTACTTTCCACGTAGCTTGTTTGTCCACTCAGGAGATCCCAGATGGTGACTGGTACTGTGCAAACTGCACTTGTAGGATATGTGGAAATTTGGTTATTGATAAAGACACTTCAGATCTGCATGATTTGTTACAATGTTCACAGTGTGAACATAAATATCATGAGACATGCCTTAAAGATAGAGAAACACCAGAAGGAGCAGTCTCGGACATTTGGTTTTGTAGTCAGAGTTGTCAGGAGGTGTACTCTGGACTTCAATCTCAGGTGGGGTTAGTTAATCAAGTTGCTGATGGCATCTCATGGACGCTTCTTAGATGCATTCATGACGACCAAAAAGTTCATTCTACACAGTGGTTTGCCCTAAAGGCAGTATGCAATACGAAATTAGCAGTTGCTCTTACTATAATGGAGGAGTGTTTTGTGTCAATGCTTGATCCAAGAACAGGCATCCACATGATACCTCAAGTTTTATACAACTGGGGGTCTGAATTTGCTCGTCTGAATTTTCAAGGGTTTTACACCATGGTATTGGAAAAACAGGATGTGTTAGTATCTGTAGCATCTATTAGGGTGCATGGAACGGCAGTGGCAGAGATGCCTCTAATTGCTACTTGCAGTCGGTATCGTCGCCAGGGAATGTGCCGATTGCTTGTGACTGCTATTGAAGAGATGTTAACATCTTTCAAGGTGGAAAGGCTTGTGATATCAGCCATTCCTGATTTGGTTGAGACATGGACTAAGGGCTTTGGATTCAAACCCGTTGATGATTTTGAAAGGAAAAGATTGAATAAGTTTAACTTGATGATCTTTCCTGGGACAGTGTTTCTTGAGAAACCGTTACACGGAGAGATGAAAAATGAAGATGAAACAGGACTGTGTGGTGAATCAACTCAAGCAACTGATGAATCAGTCAAAGTAGGTATCGGTTCTGAAGGAATGGCCATTACTGACTCATTGCTACAAGATGTTGTAAACATAACTACTGCCAATCAAATTGAACCAAAGTCAGAACATGAACCTTTGGATGGTAAAAATCAGTCTGACCATAAAGCTGGCAGTGATACCCTCAGAAAAGACAAAACACAACCTGTTGACACTGCATTACAAGCCAAAGAATCAACAGAAATAAGTAGTACCTGTTTTACTGAAGAGATCATCCAGTTGACAGTGTCAGCTGGCTCAGAGAAATCTATTGAAGAGAACAGTGTGAAGGAACTCGGAACATGCAACCAAGTGGAAATGGAAAGTGATTCAGTGCAGCAATCTAGTGAGAATTTTTGTGCTATAAAAGATGGTGCTGAACCAAATATAAGGGTTGTTGAGGACAAGAATATCAAAATAGGTGAGGGTCAGGAAAATGCTTTGCAGGGCCCTTTTTCAAATCTATCCTGCAAAACATTTCTAGGCAGCAATTTTGACACGGATTCCAGTATTGAATGCTCAGTGATGTATGATGAAACAGCTTTTTTTGGAACATTTGCAAAGTCTGCAAGCTGA 3915 0.4074 MLISNEVGDLFDDNFEGSNEERQIFSEVFSGNDIFQSTQKCLVPGVISFEHESAKNTFKSFCSSNENSVALHPSSSRLTHPEEENFNVIQHSKEAAPGCVPESLICEDQNDEDVNVKRMKFSLHELACSRSDSEKNMSSSRLSKVAVSNLSSAATGCNSEPIAFRLVESSKDGVISSCYLLNHNNLNKQAVKDDVDVTNFNTATADRHIAKEVSVSKAAASPVSQESFASRLVITSPSITVKKAGSPLNPEEMPESTNGDISNSPSMLQEEDPRTILQFQIVQLLTMAGWTIEKRQRPSRRYPESVYRTPEGKPIREFTKAWRICGELLSVEKCNLMCRDYKEWTDISQFWSDLSSALINVEKTKMQSEDPDAMLAYRWWLLDPFVVVIFVDRKIGALKKGEVVKATWTLVSSKYKVACAPIDSSSGNSNQVPGGSNLNAVHEAKIRSSRSLDKQSSDGHVPMDMSEENNASGVSYGLVHSHGSRTMQQSECSEEEGGKILVDSAFGKDSTYSVSNVILRKKMRRKCKRVSEIKMSMFCHGDMLGSTVTDQVQSLDGEACGLEEVQNYLVDNAGKKRSCRKLSSFSAIQRNTRKTNGSITGTDRSNRCHIKDDDLLVSAIFRNKDFGPKAIRGSSRAKSCKSRGQRKLKSQKGRCRLLPRNPCSAGKYNKDCNRSYLGSRTILSWLIDNGVISLNDVIQYRNTKDNVVIKDGRITKDGIICICCGKVLTLSEFKLHAGFTLNRPCVNIFMESGEPFTLCLLQAWSAEYKARKSLNLVVQTDDNDKNDDSCGLCGEGGELICCDNCPSTFHVACLSTQEIPDGDWYCANCTCRICGNLVIDKDTSDLHDLLQCSQCEHKYHETCLKDRETPEGAVSDIWFCSQSCQEVYSGLQSQVGLVNQVADGISWTLLRCIHDDQKVHSTQWFALKAVCNTKLAVALTIMEECFVSMLDPRTGIHMIPQVLYNWGSEFARLNFQGFYTMVLEKQDVLVSVASIRVHGTAVAEMPLIATCSRYRRQGMCRLLVTAIEEMLTSFKVERLVISAIPDLVETWTKGFGFKPVDDFERKRLNKFNLMIFPGTVFLEKPLHGEMKNEDETGLCGESTQATDESVKVGIGSEGMAITDSLLQDVVNITTANQIEPKSEHEPLDGKNQSDHKAGSDTLRKDKTQPVDTALQAKESTEISSTCFTEEIIQLTVSAGSEKSIEENSVKELGTCNQVEMESDSVQQSSENFCAIKDGAEPNIRVVEDKNIKIGEGQENALQGPFSNLSCKTFLGSNFDTDSSIECSVMYDETAFFGTFAKSAS* 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00931 1304 Gene3D - 935 1072 - -
Phac5g00931 1304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 832 887 IPR013083 -
Phac5g00931 1304 SMART PHD_3 831 885 IPR001965 -
Phac5g00931 1304 SMART PHD_3 789 830 IPR001965 -
Phac5g00931 1304 MobiDBLite consensus disorder prediction 243 267 - -
Phac5g00931 1304 Pfam PHD-finger 790 831 IPR019787 -
Phac5g00931 1304 MobiDBLite consensus disorder prediction 1141 1171 - -
Phac5g00931 1304 MobiDBLite consensus disorder prediction 446 478 - -
Phac5g00931 1304 ProSiteProfiles Zinc finger PHD-type profile. 787 832 IPR019787 -
Phac5g00931 1304 MobiDBLite consensus disorder prediction 1136 1177 - -
Phac5g00931 1304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 780 831 IPR013083 -
Phac5g00931 1304 Pfam Tify domain binding domain 712 762 IPR032308 -
Phac5g00931 1304 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 939 1063 IPR016181 -
Phac5g00931 1304 PANTHER PHD FINGER FAMILY PROTEIN 1 1222 - -
Phac5g00931 1304 SUPERFAMILY FYVE/PHD zinc finger 830 890 IPR011011 -
Phac5g00931 1304 CDD PHD2_CHD_II 789 829 - -
Phac5g00931 1304 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 940 1079 IPR000182 GO:0016747
Phac5g00931 1304 MobiDBLite consensus disorder prediction 251 267 - -
Phac5g00931 1304 SUPERFAMILY FYVE/PHD zinc finger 776 830 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00931 Phac-Chr5 10445680 10456162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00931 1 1099 PHD Transcription Factor Family AT3G14980 40.938 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac5g00931 TDBD 1.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00931 - - gmx:100795889 2165.19