Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00903 ATGGGCATGATTACTGTTTCTCAACCATTTTCTCCTCAGCCTGTTCCGAACCCCTTTACCTTGTCATATGTTATTGCGAATGCTTCCAATATGATTGTAACATTGTTCTTCTGTCTTTTTCTGGCCACCATATTTTCAACAATAGTTGTTCTTCTCCTATTGAGATTATGCGAAATTATAACAGATATTCTTCTTGAAACACTTGAGGATGACACTGAAGATGGAAGAACACCTTTGGTAGTTCAGTCTTTTCTGACTAACCAAGATTCTTTGAATCAAATAAGTCATAATAGGGAAAGATTACAATCACATTCACAAGCTTTTGGGAGGAGATCAATTCATAAAGCTTCATCAGTGAAACTGCCACAGCTTGTGATTTATGGACAAAATCCAGATGAGTTGAGTCCATTTTGTAGTAATTGTGTCATATGTTTGGAGAGCTTCATCACCGGGGAGTCTTGTCAAATTCTTCCACCTTGCAATCACTTATTTCATTCTTACTGCATAAGGCATTGGTTGAAAGACAATGCCACTTGCCCCATTTGTCGAAGTGTTTATTAG 561 0.3743 MGMITVSQPFSPQPVPNPFTLSYVIANASNMIVTLFFCLFLATIFSTIVVLLLLRLCEIITDILLETLEDDTEDGRTPLVVQSFLTNQDSLNQISHNRERLQSHSQAFGRRSIHKASSVKLPQLVIYGQNPDELSPFCSNCVICLESFITGESCQILPPCNHLFHSYCIRHWLKDNATCPICRSVY* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00903 186 SMART ring_2 141 182 IPR001841 -
Phac5g00903 186 Pfam Ring finger domain 140 183 IPR001841 -
Phac5g00903 186 SUPERFAMILY RING/U-box 140 186 - -
Phac5g00903 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 186 IPR013083 -
Phac5g00903 186 ProSiteProfiles Zinc finger RING-type profile. 141 183 IPR001841 -
Phac5g00903 186 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 32 184 IPR044675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00903 109 184 C3H Transcription Factor Family AT1G53010 35.802 1.39e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00903 - - pvu:PHAVU_005G065200g 309.301