Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00895 ATGAGGAATGCGTTGATTATAGCCTTTTCCATAACCATATGCTTCATCGCTTTTGTGATATCCAAGATTGTTATTTCAGTCCTCCTCTACAAAAGATGGAGAAGAAAACAGATGGTTCATGAAGAAGGCTATCCAGGAGGGAAGATAGTACTATTTAGGTCCTCCGAGCTTAAATCTCTCACAGCTGATGCGATCTTAAAGAAGACACAGAAACTGAACAACAAGGACATCATTGGGTCAGGTGGTTATGGTGTGGTTTATGGACTAAAACTAGATGAATCCACAGCCTTGGCAGTAAAAAAACTAAACCGTGGAACTGCCGAGAGAGATAAAGGTTTTGAGAGAGAGTTGGAAGCAATGGCAGACATAAAACACCGCAACATTTTGACCCTTCATGGATATTACACTGCACCACACTACAATCTTCTCATATATGAACTAATGCCCAATGGAAGTTTGGACTCCTTTTTGCATGGGAGATCAAGGGACAAGAAGTTTTTGGATTGGCCAACCAGATATAGAATAGCTGCAGGTGCAGCTAGAGGAATATCATATCTTCATCATGATTGCATCCCTCGCATTATCCACAGAGACATCAAGTCAAGTAACATATTGTTGGATGAAAATATGGATGCCCGAGTTTCTGATTTTGGATTAGCCACTTTGATGCAACCAAATAAAACTCATGTCTCAACATTAGTGGCTGGAACTTTTGGATACTTGGCACCTGAATATTTTGATACAGGAAGAGCGACACTCAAAGGGGATGTTTACAGCTTTGGAGTTGTTTTACTGGAGCTTTTAACTGGGAAAAAACCCAGTGATGAAGCATTTATGGAAGAGGGAACCATGCTTGTCACATGGGTGAAGGCTGTTGTTAGAGAGAACAAGGAGGATTTAGTCCTTGACAGTAGCTTAGGATCTTGTTCAATGCAAGAGGTAAATAAGGTGTTCAATATTGCAATGATGTGTCTTGAACCAGATCCTTTGAAGAGGCCAACCATGAGTGATGTTGTCAAAATGCTTGACCAAACACAACAAGATAAACTTGTTACATCAAAACCATCACTCTGA 1074 0.4041 MRNALIIAFSITICFIAFVISKIVISVLLYKRWRRKQMVHEEGYPGGKIVLFRSSELKSLTADAILKKTQKLNNKDIIGSGGYGVVYGLKLDESTALAVKKLNRGTAERDKGFERELEAMADIKHRNILTLHGYYTAPHYNLLIYELMPNGSLDSFLHGRSRDKKFLDWPTRYRIAAGAARGISYLHHDCIPRIIHRDIKSSNILLDENMDARVSDFGLATLMQPNKTHVSTLVAGTFGYLAPEYFDTGRATLKGDVYSFGVVLLELLTGKKPSDEAFMEEGTMLVTWVKAVVRENKEDLVLDSSLGSCSMQEVNKVFNIAMMCLEPDPLKRPTMSDVVKMLDQTQQDKLVTSKPSL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00895 357 SMART serkin_6 72 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00895 357 ProSiteProfiles Protein kinase domain profile. 72 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac5g00895 357 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Phac5g00895 357 Gene3D Phosphorylase Kinase; domain 1 48 147 - -
Phac5g00895 357 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 148 354 - -
Phac5g00895 357 Gene3D Transferase(Phosphotransferase) domain 1 148 354 - -
Phac5g00895 357 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 347 - -
Phac5g00895 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Phac5g00895 357 FunFam Receptor-like serine/threonine-protein kinase 43 147 - -
Phac5g00895 357 SUPERFAMILY Protein kinase-like (PK-like) 53 342 IPR011009 -
Phac5g00895 357 Pfam Protein kinase domain 74 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00895 Phac-Chr5 9834784 9836899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00895 5 344 Receptor kinase-like Gene Family AT2G35620 45.481 6.90e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Phac5g00895 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00895 - - ahf:112703495 554.288