Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00883 ATGAGGTTTTTGGGTTACATAGCTCAATGGAGAAGCGCAGCGAAGGAAGCGTTGGATCGCACAGCCATCACTGTGAATTTCCTGTGCTGGCTTCACTTCACCAGCAACTACCTCTGTTCCCCGTGTCACGCGTATGGGGTTAGCATGCTCCCCACCCTCAACGTTACCGGCGACGTCCTCCTCGCCGACCACCTCTCCCCGCTGCTCGGGAACGTCGGGCACGGCGACTTGGTTCTCGTTCGGTCCCCTCTCAACCCTAAGATCAGGTTGACGAAGCGCGTCGTGGCCGTGGAAGGGGACACCGTCACTTACTTCGACCCTATGCACTCTGAGGCTTCTCAAGTTGCTGTGTCAACAAAGCAGAAGGTTCCTCATAATACGAAAGTACGATGA 393 0.5573 MRFLGYIAQWRSAAKEALDRTAITVNFLCWLHFTSNYLCSPCHAYGVSMLPTLNVTGDVLLADHLSPLLGNVGHGDLVLVRSPLNPKIRLTKRVVAVEGDTVTYFDPMHSEASQVAVSTKQKVPHNTKVR* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00883 130 CDD S26_SPase_I 46 100 IPR019533 GO:0004252|GO:0006465
Phac5g00883 130 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 9 116 - -
Phac5g00883 130 Pfam Signal peptidase, peptidase S26 24 106 IPR019533 GO:0004252|GO:0006465
Phac5g00883 130 SUPERFAMILY LexA/Signal peptidase 37 106 IPR036286 -
Phac5g00883 130 Gene3D Umud Fragment, subunit A 35 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00883 Phac-Chr5 9492161 9496906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00883 49 123 MADS-box Gene Family AT1G29960 40.789 1.89e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00883 K09647 - cave:132173278 162.54