Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00882 ATGAGGTTTTTGGGTTACATAGCTCAATGGAGAAGCGCAGCGAAGGAAGCGTTGGATCGCACAGCCATCACTGTGAATTTCCTGTGCTGGCTTCACTTCACCAGCAACTACCTCTGTTCCCCGTGTCACGCGTATGGGGTTAGCATGCTCCCCACCCTCAACGTTACCGGCGACGTCCTCCTCGCCGACCACCTCTCCCCGCTGCTCGGGAACGTCGGGCACGGCGACTTGGTTCTCGTTCGGTCCCCTCTCAACCCTAAGATCAGGTTGACGAAGCGCGTCGTGGCCGTGGAAGGGGACACCGTCACTTACTTCGACCCTATGCACTCTGAGGCTTCTCAAGTTGCTGTGGTGTGTGTGCTTAATGGTGCCTAA 375 0.5707 MRFLGYIAQWRSAAKEALDRTAITVNFLCWLHFTSNYLCSPCHAYGVSMLPTLNVTGDVLLADHLSPLLGNVGHGDLVLVRSPLNPKIRLTKRVVAVEGDTVTYFDPMHSEASQVAVVCVLNGA* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00882 124 CDD S26_SPase_I 46 100 IPR019533 GO:0004252|GO:0006465
Phac5g00882 124 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 9 118 - -
Phac5g00882 124 Pfam Signal peptidase, peptidase S26 24 105 IPR019533 GO:0004252|GO:0006465
Phac5g00882 124 Gene3D Umud Fragment, subunit A 35 122 - -
Phac5g00882 124 SUPERFAMILY LexA/Signal peptidase 37 105 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00882 Phac-Chr5 9492161 9496906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00882 49 118 MADS-box Gene Family AT1G29960 42.254 6.26e-13 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00882 K09647 - cave:132173278 162.925