Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00828 ATGATAACTATCACCGGACTGAGGGATATGGATGCAATGAGTGAAGGAAACATTTTTTGGCCTAATATGTGCATAGTGGCAGTGAGAGAATATATAGATTCTCATTACTTATTAGATGCTTATGACAATGAGATGGTGTATGGAAGGAGAGCATTCAATGGAGTTCAACATCAACCTATTCATACGGCTTTTCCTATTTCATCTACTCCAACTCCTTCATTAGAGATTGCAACAAACGATCCCCAAAGTTATCATGATATAGCAAGAAGCAAAAGCAACTACAGATTTCTCCATCCGCAGTATCAAGCACAGCCTGCGCAAGACATGAGAGGAAACTCCATCGACTTTCATCCTCCACTTACACTTCCAACAAATCCTTCAAGAACTTCTTCAGTGCGCGCGACAACTCCTCCACACTGGAGGAATATTCCTCCTCAAGCCTTTCTTCAAGATGATGATGTTCCTTGGTTGGGTGACCATGATAGTGATATGCACTTGGACATTGAGGACATGTCATATGAGGAGCTTCTTGAATTAGGTGAACGAATTGGCAACGTACGCACAGGTTTGTTGGATGAAATTACTGCAAGGCAAATGGAGACAAAAACTTATCTACTTCCTAATAACTCGCGAGAAGTAGATTCTGAGGAACAAGAAAATGATCTTTGCATAATATGTCAGGATGAATATAAGAATAAACAAGAAATTGGAATTCTTCAATGTGGACATGAATATCACGAGATTGTATAA 750 0.396 MITITGLRDMDAMSEGNIFWPNMCIVAVREYIDSHYLLDAYDNEMVYGRRAFNGVQHQPIHTAFPISSTPTPSLEIATNDPQSYHDIARSKSNYRFLHPQYQAQPAQDMRGNSIDFHPPLTLPTNPSRTSSVRATTPPHWRNIPPQAFLQDDDVPWLGDHDSDMHLDIEDMSYEELLELGERIGNVRTGLLDEITARQMETKTYLLPNNSREVDSEEQENDLCIICQDEYKNKQEIGILQCGHEYHEIV* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00828 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 200 248 IPR013083 -
Phac5g00828 249 MobiDBLite consensus disorder prediction 118 137 - -
Phac5g00828 249 SUPERFAMILY RING/U-box 215 247 - -
Phac5g00828 249 MobiDBLite consensus disorder prediction 118 143 - -
Phac5g00828 249 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 57 247 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00828 Phac-Chr5 8629085 8630410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00828 159 247 C3H Transcription Factor Family AT2G15530 43.333 7.40e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00828 K19041 - pvu:PHAVU_011G149000g 393.275