Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00815 ATGGGGAAAGGAAGAGCACCATGCTGTGATAAAACTCAAGTGAAGAGAGGTCCTTGGAACCCTGCAGAAGACCTTAAACTCATAGCCTTCATCCAGAAATATGGCCATGAAAACTGGCGTGCCCTCCCAAAACAAGCTGGACTTCTGAGATGTGGGAAAAGTTGTCGATTGAGATGGATCAATTATCTAAGACCTGATGTGAAGAGAGGCAATTTTACACCAGAGGAAGAGGAAACCATAATAAGGCTACACAAGACCATGGGAAACAAGTGGTCAAAGATTGCATCACGTTTGCCTGGTAGGACAGACAATGAGATCAAGAATGTGTGGAACACCCACTTAAAGAAAAGGTTGGTTCCCAAAAAAAGTTCAGGATCAAGTACAGATGAATCCAAGCCAGAATCAACAATAACTTCCACCTCTTCCTCTTCATCTCAGTCATTTTTCTCAAATGAGAGGCCAAGTTCACCTAAGACCACAACACCTCATAATGAATGTTATGACCAAGATGATCAATTATCAATGGGAGAAAAAATTGAGCAGGATTCAGAAAAACAAGTGTCCAGTGAACTAATTGGCATGACTGAGGATCCAAAAGAGTTATCAGCTTCATTATCTTGTGAGACAAATATTATAAATTCGAGCCAGAATGTTGCATACAAACCAGAACAACAATTGGCTTCTCCTTTATCAGTTTCAATGTATTCTGTTGAGACTAATGTTGTAAATTCAGGCCACATAGTAGCACACAAAGCAGAACAACAATTGGCTTCTCCATTATCCTACCTAGGACCTTATGACGTTGGCCGTATTTTAGAAGAGGTGGATAAACCAAACCACCTGATTGAAATTCCATGGGAACCAGATTATGAGTTTTGGAAGTTGTTAGATGATGATAGCCTTGGATCTTTTCAATCAAACCAAGTCCAATTAGGTGAGTTCCCAGCCAACCAAAACATGATTCTTGAAGAGGGTGTTCAAGATGCTGAAGCCAGGAAGTGGTCCCATGATTTTGAGAATGAGTTTGGAGTAGTAGGTGAGGTAAAGGAGTCAAACAAGGATGATTTCCTACCAAAGAACTATGCAGTTGAGCCACAAATGGACCACACTCATGCATTTGATTTCGATGATATGACACGAGCAGAATCCGAATTGGACTTTGATAATATCCAATTATGGCCCTTTTGGCCTCAAAATACTAGTCCCTAG 1209 0.4069 MGKGRAPCCDKTQVKRGPWNPAEDLKLIAFIQKYGHENWRALPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTPEEEETIIRLHKTMGNKWSKIASRLPGRTDNEIKNVWNTHLKKRLVPKKSSGSSTDESKPESTITSTSSSSSQSFFSNERPSSPKTTTPHNECYDQDDQLSMGEKIEQDSEKQVSSELIGMTEDPKELSASLSCETNIINSSQNVAYKPEQQLASPLSVSMYSVETNVVNSGHIVAHKAEQQLASPLSYLGPYDVGRILEEVDKPNHLIEIPWEPDYEFWKLLDDDSLGSFQSNQVQLGEFPANQNMILEEGVQDAEARKWSHDFENEFGVVGEVKESNKDDFLPKNYAVEPQMDHTHAFDFDDMTRAESELDFDNIQLWPFWPQNTSP* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00815 402 Gene3D - 16 68 - -
Phac5g00815 402 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Phac5g00815 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Phac5g00815 402 FunFam MYB transcription factor 70 145 - -
Phac5g00815 402 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Phac5g00815 402 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 209 - -
Phac5g00815 402 SMART sant 15 65 IPR001005 -
Phac5g00815 402 SMART sant 68 116 IPR001005 -
Phac5g00815 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Phac5g00815 402 CDD SANT 71 114 IPR001005 -
Phac5g00815 402 CDD SANT 18 63 IPR001005 -
Phac5g00815 402 Gene3D - 71 143 - -
Phac5g00815 402 FunFam Transcription factor RAX3 9 69 - -
Phac5g00815 402 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Phac5g00815 402 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Phac5g00815 402 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Phac5g00815 402 MobiDBLite consensus disorder prediction 124 168 - -
Phac5g00815 402 MobiDBLite consensus disorder prediction 117 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00815 Phac-Chr5 8332462 8335480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00815 1 120 MYB Transcription Factor Family AT1G56160 82.500 2.48e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac5g00815 Myb_DNA-binding 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00815 K09422 - gmx:100101836 596.66