Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00802 ATGGGTGTGAACCAAAATTTCAACAAGGATGATCATCATGAGTGTGTGGATGATGATGAAATTCCACTTCCCGGATTTCGATTCCACCCCACAGATGAAGAGCTTGTCAGTTTCTATCTTCGAAGGAAGCTTGACAAGAAACCCATCAGCATCGACCTCATCAAACAGATTGATATTTACAAATACGATCCTTGGGATCTTCCAAAAAGCAGTGGCAGTGGAGGAGAGAAGGAGGGGTACTTCTTCTGCAGAAGAGGGAGGAAGTATAGGAATAGCATAAGGCCTAACAGAGTCACTGGCTCTGGGTTCTGGAAAGCAACTGGCATAGACAAGCCAGTGTACTCATATGGAGGAGAAGGCAATGACTGCATTGGACTCAAAAAAACCCTAGTGTACTACCGTGGCAGTGCAGGCAAAGGCACCAAAACCGATTGGATGATGCACGAGTTTCGACTTCCTTCTAACACAGACACCAACACAAGCCTTCCCAACTCCAGGAACTATGTAGATGTTCCCCAAGAAGCTGAAATTTGGACGCTGTGTAGAATTTTCAAAAGAAATGTGTCACAGAGGAAGCACGTGCCGGACTTGAAACAAGTATCTGCTAAGCGCCATGCATTTTACGACAAGAGCTCCAGAACGAAAAATGTGGAGTTTGACAGTGCTAATCAAGAATCGTATATAAACTTTGGTGGCCACTATCAGAACGAGCAGAAACCCTTCATCAACTATACAAACAGTGATAAAAGGAATCAGTTTAATGTGATGAGTCAGTTGTGTTCTACGGTGGCACAGCAGCAACCTCAACTAACTGCACCATCTTCTAACCTTTGGAGTAACCCACCGGGGAACGATTTCTTCACATTCGATAACTGGGATGAACTTGGATCTGTGGTGAAGTTAGCTGTTGATTCGCCTAGCTTGTAG 927 0.4455 MGVNQNFNKDDHHECVDDDEIPLPGFRFHPTDEELVSFYLRRKLDKKPISIDLIKQIDIYKYDPWDLPKSSGSGGEKEGYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSYGGEGNDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNTDTNTSLPNSRNYVDVPQEAEIWTLCRIFKRNVSQRKHVPDLKQVSAKRHAFYDKSSRTKNVEFDSANQESYINFGGHYQNEQKPFINYTNSDKRNQFNVMSQLCSTVAQQQPQLTAPSSNLWSNPPGNDFFTFDNWDELGSVVKLAVDSPSL* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00802 308 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 257 - -
Phac5g00802 308 ProSiteProfiles NAC domain profile. 22 186 IPR003441 GO:0003677|GO:0006355
Phac5g00802 308 Pfam No apical meristem (NAM) protein 24 152 IPR003441 GO:0003677|GO:0006355
Phac5g00802 308 Gene3D NAC domain 31 190 IPR036093 GO:0003677|GO:0006355
Phac5g00802 308 FunFam NAC domain-containing protein 35 31 189 - -
Phac5g00802 308 SUPERFAMILY NAC domain 23 186 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00802 Phac-Chr5 8004240 8006594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00802 19 195 NAC Transcription Factor Family AT5G39820 58.947 1.21e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac5g00802 NAM 1.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00802 - - gmx:100790471 549.28