Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00799 ATGAGAGCACACTCCATCGACTTTCATCCTCCACTTACACTTCCAACAAATCCTTCAAGCACTTCTTCAGTGCGCGCGACAACTCCTCCACATTGGAGGAATTTTCATCCTCAAGCCTTTCTTCAAGATGATGATGTTCCTTGGTTGGGTGACCATGATAGTGATATGCACTTGGACATTGAGGACATGTCATATGAGGAGCTTCTTGAATTAGGTGAACGGATTGGCAACGTAGGCACAGGTTTGTTGGATGAAATTATTGCAAGGCAAATGAAGACAAAAACTTATATACTTCCTAATAACTCGGGAGAACTAGCTTCTGAGGAACAAGAAAATGATCTTTGCATAATATGTCAGGATGAATATAAGAACAAACAGGAAATTGAAATTCTTCAATGTGGACATGAATATCACGCAGATTGTATAAGGACATGGTTACACGAGAAAAATGTTTGTCCCTTATGCAAATCAGAAGCATTGACTCTTGGATAA 492 0.3963 MRAHSIDFHPPLTLPTNPSSTSSVRATTPPHWRNFHPQAFLQDDDVPWLGDHDSDMHLDIEDMSYEELLELGERIGNVGTGLLDEIIARQMKTKTYILPNNSGELASEEQENDLCIICQDEYKNKQEIEILQCGHEYHADCIRTWLHEKNVCPLCKSEALTLG* 164
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00799 163 MobiDBLite consensus disorder prediction 12 29 - -
Phac5g00799 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 160 IPR013083 -
Phac5g00799 163 Pfam RING-H2 zinc finger domain 109 156 IPR024766 GO:0008270
Phac5g00799 163 MobiDBLite consensus disorder prediction 1 29 - -
Phac5g00799 163 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 19 160 IPR045191 GO:0061630
Phac5g00799 163 SMART ring_2 115 155 IPR001841 -
Phac5g00799 163 ProSiteProfiles Zinc finger RING-type profile. 115 156 IPR001841 -
Phac5g00799 163 SUPERFAMILY RING/U-box 109 159 - -
Phac5g00799 163 CDD RING-H2_RNF24-like 113 159 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac5g00799 Phac-Chr5 7950064 7950830 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00799 51 160 C3H Transcription Factor Family AT2G15530 47.273 8.01e-30 112
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00799 K19041 - pvu:PHAVU_011G149000g 301.212