Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac5g00799 | ATGAGAGCACACTCCATCGACTTTCATCCTCCACTTACACTTCCAACAAATCCTTCAAGCACTTCTTCAGTGCGCGCGACAACTCCTCCACATTGGAGGAATTTTCATCCTCAAGCCTTTCTTCAAGATGATGATGTTCCTTGGTTGGGTGACCATGATAGTGATATGCACTTGGACATTGAGGACATGTCATATGAGGAGCTTCTTGAATTAGGTGAACGGATTGGCAACGTAGGCACAGGTTTGTTGGATGAAATTATTGCAAGGCAAATGAAGACAAAAACTTATATACTTCCTAATAACTCGGGAGAACTAGCTTCTGAGGAACAAGAAAATGATCTTTGCATAATATGTCAGGATGAATATAAGAACAAACAGGAAATTGAAATTCTTCAATGTGGACATGAATATCACGCAGATTGTATAAGGACATGGTTACACGAGAAAAATGTTTGTCCCTTATGCAAATCAGAAGCATTGACTCTTGGATAA | 492 | 0.3963 | MRAHSIDFHPPLTLPTNPSSTSSVRATTPPHWRNFHPQAFLQDDDVPWLGDHDSDMHLDIEDMSYEELLELGERIGNVGTGLLDEIIARQMKTKTYILPNNSGELASEEQENDLCIICQDEYKNKQEIEILQCGHEYHADCIRTWLHEKNVCPLCKSEALTLG* | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac5g00799 | 163 | MobiDBLite | consensus disorder prediction | 12 | 29 | - | - | |
Phac5g00799 | 163 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 92 | 160 | IPR013083 | - | |
Phac5g00799 | 163 | Pfam | RING-H2 zinc finger domain | 109 | 156 | IPR024766 | GO:0008270 | |
Phac5g00799 | 163 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Phac5g00799 | 163 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 19 | 160 | IPR045191 | GO:0061630 | |
Phac5g00799 | 163 | SMART | ring_2 | 115 | 155 | IPR001841 | - | |
Phac5g00799 | 163 | ProSiteProfiles | Zinc finger RING-type profile. | 115 | 156 | IPR001841 | - | |
Phac5g00799 | 163 | SUPERFAMILY | RING/U-box | 109 | 159 | - | - | |
Phac5g00799 | 163 | CDD | RING-H2_RNF24-like | 113 | 159 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac5g00799 | Phac-Chr5 | 7950064 | 7950830 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac5g00799 | 51 | 160 | C3H Transcription Factor Family | AT2G15530 | 47.273 | 8.01e-30 | 112 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac5g00799 | K19041 | - | pvu:PHAVU_011G149000g | 301.212 |