Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac5g00797 | ATGAGAGCACACTCCATCGACTTTCATCCTCCACTTACACTTCCAACAAATCCTTCAAGCACTTCTTCAGTGCACGCGACAACTCCTCCACACTGGAGGAATTTTCCTCCTCAAGCCTTTCTTCAAGATGATGATGTTCCTTGGTTGGGTGACCATGATAGTGATATGCACTTGGACATTGAGGACATGTCATATGATGTATTTTCTTATGAATGTGGATTGGCTATGAGGCAAATGAAGACAAAAACTTATCTACTTCCTAATAACTCGGGAGAAGTAGCTTCTGAGGAACAAGAAAATGATCTTTGCATAATATGTCAGGATAAATATAAGAACAAACAGGAAATTGGAATTCTTCAATGTGGACATGAATATCACGCAGATTGTATAAGGACATGGTTACACGAGAAAAATGTTTGTCCCTTATGCAAATCAGAAGCATTGACTCTTGGATAA | 456 | 0.3904 | MRAHSIDFHPPLTLPTNPSSTSSVHATTPPHWRNFPPQAFLQDDDVPWLGDHDSDMHLDIEDMSYDVFSYECGLAMRQMKTKTYLLPNNSGEVASEEQENDLCIICQDKYKNKQEIGILQCGHEYHADCIRTWLHEKNVCPLCKSEALTLG* | 152 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac5g00797 | 151 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 148 | IPR013083 | - | |
Phac5g00797 | 151 | MobiDBLite | consensus disorder prediction | 12 | 29 | - | - | |
Phac5g00797 | 151 | SUPERFAMILY | RING/U-box | 97 | 147 | - | - | |
Phac5g00797 | 151 | SMART | ring_2 | 103 | 143 | IPR001841 | - | |
Phac5g00797 | 151 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Phac5g00797 | 151 | ProSiteProfiles | Zinc finger RING-type profile. | 103 | 144 | IPR001841 | - | |
Phac5g00797 | 151 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 18 | 148 | IPR045191 | GO:0061630 | |
Phac5g00797 | 151 | Pfam | RING-H2 zinc finger domain | 97 | 144 | IPR024766 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac5g00797 | Phac-Chr5 | 7932360 | 7933126 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac5g00797 | 51 | 148 | C3H Transcription Factor Family | AT2G15530 | 34.545 | 5.36e-17 | 75.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac5g00797 | K19041 | - | pvu:PHAVU_011G149000g | 255.758 |