Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00762 ATGAAATCTGGCAGAGACAAAGAGAAACAGAACGATCGCTGCATTAGTTCGCATATGCAGACCCTCCATCGCCGTCTTCTCCACACCCTAAACCTTGGCAACAGACATTTTGATGAGAAGACAAAGAGGTGGAGGTGGCAGTGTGCCAATATTGAAGTGCAGAAAAATGTATTACGAGCAATTGGTGCCTTTCTTGATTCCTTATCGGGAGATGCACGTGCAGCACGTCATGCTGTTGTTAAGGAATCTGTTCCTGATATTTTGGGAGCATTATTATGGATTCTTCAATGCAAAAGTGAGGCCTTACTAAGCATGGCATCAACTGTTGCAGTGAAGTTAGTTAGTGTTCTGCCTAATCCATTATTGCAATCACATATGTTGGATCTTGTTTATTGTCTATCATCCTTGCTATCTTCACATCAAGTAGAAGTTGCTATACCCTGTGCTACCGCTTTGAATTTTGTAATCTCAAATTTGAGTGCTACAAGTGAGAAGGAAGTTATGGAAGCACTGAAAGAAATGGAGACTTCCCTTCAAATTGTTGGAAATGTAAAAGATTTTGCTGAAGGTGCAAAGAAAATTGAGTATTTTGAAGAGATGACTTTACTTTTGAGCACTATACTGTGGCGCTGGCCTCCGTCTAGGTTCCCTGTTTGTAATGATGTATTACTTATGAAAGGTTTAGCAAACATCCATACAAAGACAGATAGTTCTACTAAACTTGCACTTCTAAAGTTGTACACGTCTATAGCTTTATGTGATTCTGCAGCAAGAAAACTTATAGAGGATGAAGAAGTATTTCCACAAATGTTTGTGCAGGCAATGGGAAAATCAAACCCTCATGCTATTCGGATAGAGGGATTTAGGCTTGCTCAATGCCTATTGAGATCCCAAGATAATTGTTTAAAAGTGGTTGGTTTGTGTGGTGAAGCTCTTGTTGAGGCCATAATTTGTGGAATGACAGAAACTAGGCTGAGTTCTAAAAAAATTGGAACCAACCATGGGTCTTTGTCAGTGGAAGCATGCCAGTTGGCTCTAATAACTCGCTGGGCAGGTGATCATCATACCAATTTTTGGAAACAAGGAATTGATAGAGTCCTTCTTAATCTTCTGATTGAAAATATTCAAGACCAATTGTTTGAACCTGTCTTGTCATTGGAAAAACAAATATATATGGCAAAAGAGGGATTGAAAGGCAATTATCATCTTGGTATTAGGAGTTATCTGTGGGACATTCTTGGGTGGCTTACAATTCACTGTGGAGAAAATTTAAACCCTTGTACTCGTGGTAGTGAGCTCTGCATCAACTTACTAATTACATGTGCATGCTTGAGTTTTGTGGATACACTTGAAAAATGGTGCAGAATTTGTCAAAAGGATATTGATGATCATTTTCAAAGTGAACCAGTATTTAGGGCTGTTCTAATGATGATTCATTCTCCATGCAATTCCATCTCCTCACACACTAGATTCTTATTATCAGATGTACTAAAGGTGAAAGGCATGCCATGTTTGAAAAGCTTACTACATACTCTAGATTATACATCATCCCTGGAAAGCTATGGATCATTTGATAAACTTCAACTGGTTGTTAATTTAATTGGGTTTACTTGTCTTTCAAGTTTACCAGAGTACCAAAGATGTATCATTGAGAGCAAAGGGATAAAGGTGATTGTTCTTCTTCTGAAACGGTGCTTAGATAATGACATTCATATTGAAAGGCAGAGCTTTACTCCTCATTTGCATACAACATGCCATGAAAGGTCTTGTTGCTGTTTTGACAAAGGAGATTGGGAAGGTTCCAATGTTCTCTTATTTTATAGTTTGTTGGGCTTAACTGAAATTCTTCATCAGTGTGACCTTTTACGAGAGAATCCTCAGCAATTTTCTAGAGAGGTGACAAACATTAGTCCACAGTTAGTTAGCAAACTTCAAGAGATCTGTAAAAGCAACTCTTTCAGTCCTGGTGTGAGATGGTATGTTTCTTATCTTCTAACTTATTTTGGATATTACGGTTTCCCAACTGTATTAGCCAAAAGGATTGGGAAATCTCTCAATACGGAAGAATACTCAGACATGAAGCTTGTTGTAGCAAATGGGGAATCTCTGAGTGTTCATGCTGTTATTCTTGCTGTTCGATGTCCATCACTACTGCCTCCTCAATTATTACCTTGTAGGAAGAGTTCTAAAGAGATAGCAGATAATTTTGTTAGAGAGACCATGAGAGAAGTTCGATTATCTTCTCATGTTGATTATGAAGCATTGGTATTGTTGTTGGAATATGTGTACTTGGGATGCTTACATGCCAGTGAAGAAACAGCAAAGAAGCTAAAAATTCTCGCTAAGCGCTGCAATCTACAACCTTTGTTCCAAATGCTTCACAGACATCGTCCAAAGTGGGGCTTACCTTTCCCCAGCTTCAATCTTACTTCATCTTTTGGTTTAGCTGGAAGTTGTTTTTCGGATGTCATATTGGCAGCTAAATCAAATGAGCTTGTTGGGTGGACTTGCAATATTTGTTCTAACACAGTGCCCCATATGCATGTTCACAAAGTTATATTGCAGTCTGGTTGTGATTATCTACAAGGTTTGTTCCGGTCAGGAATGCAAGAAAGCTCATGA 2622 0.386 MKSGRDKEKQNDRCISSHMQTLHRRLLHTLNLGNRHFDEKTKRWRWQCANIEVQKNVLRAIGAFLDSLSGDARAARHAVVKESVPDILGALLWILQCKSEALLSMASTVAVKLVSVLPNPLLQSHMLDLVYCLSSLLSSHQVEVAIPCATALNFVISNLSATSEKEVMEALKEMETSLQIVGNVKDFAEGAKKIEYFEEMTLLLSTILWRWPPSRFPVCNDVLLMKGLANIHTKTDSSTKLALLKLYTSIALCDSAARKLIEDEEVFPQMFVQAMGKSNPHAIRIEGFRLAQCLLRSQDNCLKVVGLCGEALVEAIICGMTETRLSSKKIGTNHGSLSVEACQLALITRWAGDHHTNFWKQGIDRVLLNLLIENIQDQLFEPVLSLEKQIYMAKEGLKGNYHLGIRSYLWDILGWLTIHCGENLNPCTRGSELCINLLITCACLSFVDTLEKWCRICQKDIDDHFQSEPVFRAVLMMIHSPCNSISSHTRFLLSDVLKVKGMPCLKSLLHTLDYTSSLESYGSFDKLQLVVNLIGFTCLSSLPEYQRCIIESKGIKVIVLLLKRCLDNDIHIERQSFTPHLHTTCHERSCCCFDKGDWEGSNVLLFYSLLGLTEILHQCDLLRENPQQFSREVTNISPQLVSKLQEICKSNSFSPGVRWYVSYLLTYFGYYGFPTVLAKRIGKSLNTEEYSDMKLVVANGESLSVHAVILAVRCPSLLPPQLLPCRKSSKEIADNFVRETMREVRLSSHVDYEALVLLLEYVYLGCLHASEETAKKLKILAKRCNLQPLFQMLHRHRPKWGLPFPSFNLTSSFGLAGSCFSDVILAAKSNELVGWTCNICSNTVPHMHVHKVILQSGCDYLQGLFRSGMQESS* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00762 873 ProSiteProfiles BTB domain profile. 691 771 IPR000210 GO:0005515
Phac5g00762 873 SUPERFAMILY ARM repeat 48 731 IPR016024 -
Phac5g00762 873 PANTHER OS06G0674800 PROTEIN 6 872 IPR044953 -
Phac5g00762 873 Gene3D Potassium Channel Kv1.1; Chain A 674 796 IPR011333 -
Phac5g00762 873 Gene3D - 39 377 IPR011989 -
Phac5g00762 873 SUPERFAMILY POZ domain 671 793 IPR011333 -
Phac5g00762 873 Pfam BTB/POZ domain 684 794 IPR000210 GO:0005515
Phac5g00762 873 SMART BTB_4 691 801 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00762 Phac-Chr5 7433867 7440697 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Phac5g00762 BTB 4.3e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00762 - - gmx:100786565 1492.25