LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac5g00751	ATGGCTTCCGAGAACCTAGACCCCACCACAGTCTCGAAAGCCGTAGATGCGCTTCTCAAATGGCGTCGTTCCCAATCTGAGACTCAAAAGCCCAAACTCTTCGACGAAGATGATGAATTCGTGTACCTCATCGTAACGCTGAAGAAGGTTCCCTCGAAATCGCGCGTTAACCCATACAAGATCCCTCTCCCTCACTCCCTCCTTTCGGAGTTCTCCGAACAGTGTCTCATCCTCGACGACCGGCCCAACAAGGCCCGCGTGACCAAGGCGCAGGCCCAGGCCAGAATCCAATCGGAGTCCATCCCCATCGCGAAAGTCCTCAAACTGTCAAAGCTGGCCTCCGATTATCGCGCTTTTGAGGCGAAGCGGAAGCTCTGTGATTCCTACGATTTGTTTTTTTCGGAGAAGAGTATTGTGCCGTTGCTTCCTCGGCTACTCGGGAAGCAGTTTTTCAAGAAGAGGAAGTTGCCGGTGCCGGTGGATCTGAAGAAGAGTAACTGGAAGGAGCAGGTGGAGAAGGCGTGCTCGTCCGCGATGCTGTTCATGCGGACCGGCACGTGTAGCGTGGTTAGGGTTGCGAAGGTGGGGATGGAGAGGGACTCGATTGTGGAGAATGTGGTGGCTGCGGTTGAGGGGATTGTGGAGGTTGTGCCGAAGAAGTGGGGGAATGTGCGGTCGCTGCATTTGAAGATGATGGAGAGTGTCGCGTTGCCGGTGTATCAGGTGGTTCCGGATGTGAAGTTGAGGATTGAGGGTGCTAACGAGCAAGATGAGATAAAGGAGAAGAACAAGAAGAAGAAAAAGGACGGCGAGGTTCGTGAATCGGCGAAGAAGAAGGGGAGGATTCATGAAGTTAGGTATATGGATGAGAGTGGTGGTGGGGATGAGATTGAAAATGAATTGGCGAGTGATGATAAGGTGAATGAGAAGAGGAAGAGAGGGGATTCGAGTGTGTTGAGTGGTGAGAAGAAGTTGAAGAAATCGTCTGGTGTAAAGGAGAAGAGGAAAAAGGGGAAGAGTGGAAGTGAATTGTTTGCTGAGGATAAGGAGTCTAGTGCCAAGGAGAAGAAGAAAAAGGTGAAGAATGGAAGTGAATTGGTTGTTAGGGATGAAGAATCTGGTGTGAAGAAGACGAAGAAAGGGGACTTGAAGAAGATGAAAACAGGGGAAGTGAAGGTGAAGGCTGTGAAAAGTGTGAAGGCTAAGAAAATTAAGAAGATTTAA	1224	0.5008	MASENLDPTTVSKAVDALLKWRRSQSETQKPKLFDEDDEFVYLIVTLKKVPSKSRVNPYKIPLPHSLLSEFSEQCLILDDRPNKARVTKAQAQARIQSESIPIAKVLKLSKLASDYRAFEAKRKLCDSYDLFFSEKSIVPLLPRLLGKQFFKKRKLPVPVDLKKSNWKEQVEKACSSAMLFMRTGTCSVVRVAKVGMERDSIVENVVAAVEGIVEVVPKKWGNVRSLHLKMMESVALPVYQVVPDVKLRIEGANEQDEIKEKNKKKKKDGEVRESAKKKGRIHEVRYMDESGGGDEIENELASDDKVNEKRKRGDSSVLSGEKKLKKSSGVKEKRKKGKSGSELFAEDKESSAKEKKKKVKNGSELVVRDEESGVKKTKKGDLKKMKTGEVKVKAVKSVKAKKIKKI*	408

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac5g00751	407	Gene3D	-	85	177	IPR016095	-
	Phac5g00751	407	CDD	Ribosomal_L1	11	239	IPR028364	-
	Phac5g00751	407	MobiDBLite	consensus disorder prediction	259	383	-	-
	Phac5g00751	407	MobiDBLite	consensus disorder prediction	335	383	-	-
	Phac5g00751	407	Pfam	Ribosomal protein L1p/L10e family	32	235	IPR028364	-
	Phac5g00751	407	MobiDBLite	consensus disorder prediction	259	328	-	-
	Phac5g00751	407	SUPERFAMILY	Ribosomal protein L1	7	240	IPR023674	-
	Phac5g00751	407	PANTHER	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	13	234	-	-
	Phac5g00751	407	FunFam	Ribosomal protein L1p/L10e family	85	176	-	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac5g00751	128	230	Cytoplasmic Ribosomal Protein Gene Family	AT2G27530	31.068	2.11e-09	55.5

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac5g00751	K14775		-	gmx:100815650	490.345

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