Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00742 ATGTTAATTTTAGTGGGGAGCAAGCAGGGGACAATGAGTTCTCTTGCTTCTCCAGTGAGTTTGGGGAGCCTTATGGGTGTGAGTTCCTCTGGAAGGTCTCATTCTGGGGTGAGGAGGGTCTCTTTTTCCAGAGGGAATTGTAAGGGGAGAAAGAGATGGCATTGTTTATCATTGTCTGTGTGTAGATATTCAGTGACCACAACTGATTTTATTGCTGACCAAGGAAATTCAGTGTCCCTTGATTCTAACAGTAATAGTAGTAGTAGTAGTAGTAGTAAGGGTGGTGGAGATGATGGTACTGGTTTTGTGCTTAAGCCTCCTCCAAAGCCTGTGTTGAAGGCACCAGACAATAGAGATGACCCCATCTTGGGGCCTTCAAGGACTACTGGGGATGTGGAAGAGAGGAATAAAGTGATTGAATCACTTGGGGAGGTGTTGGAGAAGGCGGAAAAGCTGGGGAGTTCTAAGGTGAATGGTGATAAGAATAATGGTTCAGTGAATAAACCAGTAAGGAATAATGCTGGTGGTAGTCCTAGGACTGAGAAACCGGTGAATTCAGCAGCATCTCTGAAGTCTAAAACCTTGAAGAGTGTATGGCGTAAAGGGGACTCTGTTGCATCAGTGCAGAAGGTTGTGAAGGAAGTACCAAAGCCTAGTTATAACAAGAATGAAGAGGAGAAGTCTCAAACTAGAGGAGGGGAGAAGGTGATTTCTCAAACTCGTGCTCCCCAACCACCTTCGAAACCTCAGCCTTTCAAACCTCAACAACCTTCAAAACCTCAACCTGCGTTACTATCGAAACCTTCTATAGCTCCCCCACCTGTCAAAAAACCTGTTGTCTTGAGGGACAAAGGAGCAGCTGAAACATCGGTTAAATCAAAAGAAAAGAAGTCACCCATCTTGATTGACAAGTTTGCTTCGAAGAAACCAGTAGTTGATCCTCTAATTGCTCAAGCAGTTCTAGCCCCTCCAAAACCAGGGAAGGCACCTTCCCCGGGAAAATTTAAAGATGATTTCCGGAAGAAAGGTGCTCTGGCTGGGGGAGGACGAAGAAGACGAATTTTGGATGACGAAGATGTGATTCAGGACGCATCAGAACTTGATGTCTCTATTCCTGGTGCTGCAACAGCAAGAAAAGGAAGGAAATGGAGTAAAGCAAGTCGAAAGGCAGCACGGCTTCAGGCTGCTAGGGATGCAGCTCCTGTCAAAGTAGAAATTTTGGAGGTTGGTGACAGTGGTATGCTGGTGGAGGAATTGGCATACTGTTTGGCCACCAGTGAAGGTGAAATCCTTGGTTATCTGTACTCCAAGGGGATTAAACCAGATGGGGTACAAACTATAGACAAAGATATGGTAAAGATGATTTGTAAAGAGTATGATGTTGAAGTCATAGATGCAGACCCAGTCAAAGTGGAAGGTTTAGTGAAGAAAAGAGAAATTCTTGACGAAGATGACCTTGATAAACTCAAAGATAGGCCTCCTGTTATTACTATTATGGGCCATGTAGATCATGGCAAGACAACTCTTTTGGATTATATACGGAAGAGCAAGGTAGCTGCTTCTGAAGCTGGTGGGATCACACAAGGAATTGGGGCCTATAAAGTGCAAGTACCTTTTGATGGCAAAACGTTGCCCTGTGTTTTCCTTGACACTCCTGGACATGAGGCATTTGGAGCGATGAGAGCTCGTGGAGCAAGTGTAACAGACATTGCTGTTATTGTTGTGGCTGCCGATGATGGAATTCGTCCTCAAACAAATGAAGCTATTGCTCATGCCAAAGCAGCGGGAGTACCCATAATCATTGCTATAAACAAGATAGATAAAGATGGAGCAAATCCAGAACGAGTCATGCAGGAGCTTTCTTCAATTGGTTTAATGCCAGAAGACTGGGGTGGCAACACCCCAATGGTTCCGATAAGTGCTCTTAAAGGGAAGAATGTGGATGATCTCTTAGAAACTGTTATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCTAATCCTGATAGAAGTGCAAAGGGAACAGTCATCGAGGCTGGGCTAGATAAATCAAAGGGACCATTTGCTACATTTATTGTGCAGAATGGCTCCCTTAGACGGGGTGACATAGTAGTTTGTGGAGAAGCTTTTGGAAAGGTGCGGGCATTATTTGATGATGGTGGAAAACGTGTTGACGAAGCTACACCTTCTATACCTGTACAGGTTATTGGATTGAATAATGTTCCTATTGCCGGTGATGTATTTGAGGTTGTTGAATCCCTTGATGCTGCACGTGAAAGGGCAGAGACTCGTGCTGAGTCACTGCGAAATGAGCGTATTTCAGCTAAGGCAGGAGATGGCAAGATCACCCTTTCTTCCTTAGCTTCGGCAGTTTCCTCAGGAAAGCTATCTGGACTTGACTTGCATCAACTAAATATTATTTTGAAGGTTGATCTTCAGGGATCTATTGAAGCTGTAAGAAAAGCTCTGCAGGTGCTACCACAAGAAAATGTCACACTAAAGTTTTTGTTGGAAGCAACAGGTGATGTAAACACTAGTGATGTGGACCTTGCAGTTGCAAGCAAGGCCATCATTGTGGGCTTTAATGTGAAAGCACCAGGCTCTGTGAAAAGCTATGCTGATAACAAAGCGGTTGAGATTAGATTATACAGAGTTATTTATGAATTAATTGACGACGTACGAAAGGCGATGGAAGGGCTCCTAGAACCAGTTGAGGAACAATTAACAATTGGTTCAGCAGTAGTACGAGCTGTATTCAGCAGTGGTAGTGGTCGTGTTGCTGGATGCATGGTTACAGAGGGAAAGGTGCTAAAAGATTGTGGTATTCGAGTCAAGCGGAAGGGAAAAATAGTTCATGTTGGTATTATTGATTCTTTGAGACGAGTGAAGGAAATTGTTAAAGAGGTAAATGCTGGTCTTGAGTGTGGACTTGGGTTGGAAGACTTTGATGATTGGGAAGAGGGTGACATAATTGAAGCCTTCAACACAATTGAGAAGAAGAGGACCCTTGAAGAGGCCTCAGCATCAATGGCAGCTGCTGTGGAGGGAGTAGGAGTTGCACTGTAG 3063 0.4424 MLILVGSKQGTMSSLASPVSLGSLMGVSSSGRSHSGVRRVSFSRGNCKGRKRWHCLSLSVCRYSVTTTDFIADQGNSVSLDSNSNSSSSSSSKGGGDDGTGFVLKPPPKPVLKAPDNRDDPILGPSRTTGDVEERNKVIESLGEVLEKAEKLGSSKVNGDKNNGSVNKPVRNNAGGSPRTEKPVNSAASLKSKTLKSVWRKGDSVASVQKVVKEVPKPSYNKNEEEKSQTRGGEKVISQTRAPQPPSKPQPFKPQQPSKPQPALLSKPSIAPPPVKKPVVLRDKGAAETSVKSKEKKSPILIDKFASKKPVVDPLIAQAVLAPPKPGKAPSPGKFKDDFRKKGALAGGGRRRRILDDEDVIQDASELDVSIPGAATARKGRKWSKASRKAARLQAARDAAPVKVEILEVGDSGMLVEELAYCLATSEGEILGYLYSKGIKPDGVQTIDKDMVKMICKEYDVEVIDADPVKVEGLVKKREILDEDDLDKLKDRPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVQVPFDGKTLPCVFLDTPGHEAFGAMRARGASVTDIAVIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPERVMQELSSIGLMPEDWGGNTPMVPISALKGKNVDDLLETVMLVAELQELKANPDRSAKGTVIEAGLDKSKGPFATFIVQNGSLRRGDIVVCGEAFGKVRALFDDGGKRVDEATPSIPVQVIGLNNVPIAGDVFEVVESLDAARERAETRAESLRNERISAKAGDGKITLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVRKALQVLPQENVTLKFLLEATGDVNTSDVDLAVASKAIIVGFNVKAPGSVKSYADNKAVEIRLYRVIYELIDDVRKAMEGLLEPVEEQLTIGSAVVRAVFSSGSGRVAGCMVTEGKVLKDCGIRVKRKGKIVHVGIIDSLRRVKEIVKEVNAGLECGLGLEDFDDWEEGDIIEAFNTIEKKRTLEEASASMAAAVEGVGVAL* 1021
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00742 1020 CDD IF2_eIF5B 494 660 - -
Phac5g00742 1020 FunFam Translation initiation factor IF-2 799 904 - -
Phac5g00742 1020 FunFam Translation initiation factor IF-2 488 666 - -
Phac5g00742 1020 CDD IF2_mtIF2_II 671 765 IPR044145 -
Phac5g00742 1020 MobiDBLite consensus disorder prediction 156 193 - -
Phac5g00742 1020 FunFam Translation initiation factor IF-2 904 1001 - -
Phac5g00742 1020 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 798 910 IPR036925 -
Phac5g00742 1020 FunFam Translation initiation factor IF-2 667 785 - -
Phac5g00742 1020 MobiDBLite consensus disorder prediction 281 300 - -
Phac5g00742 1020 Gene3D - 799 904 IPR036925 -
Phac5g00742 1020 Pfam Translation-initiation factor 2 799 892 IPR023115 -
Phac5g00742 1020 Gene3D - 488 666 IPR027417 -
Phac5g00742 1020 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 197 1008 IPR015760 -
Phac5g00742 1020 ProSitePatterns Initiation factor 2 signature. 953 975 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Phac5g00742 1020 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 491 664 IPR000795 GO:0003924|GO:0005525
Phac5g00742 1020 Gene3D Translation factors 905 1001 - -
Phac5g00742 1020 NCBIfam translation initiation factor IF-2 414 1002 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Phac5g00742 1020 SUPERFAMILY Translation proteins 907 1000 IPR009000 -
Phac5g00742 1020 NCBIfam small GTP-binding protein domain 493 654 IPR005225 GO:0005525
Phac5g00742 1020 MobiDBLite consensus disorder prediction 322 343 - -
Phac5g00742 1020 Pfam Elongation factor Tu GTP binding domain 496 656 IPR000795 GO:0003924|GO:0005525
Phac5g00742 1020 SUPERFAMILY Translation proteins 667 751 IPR009000 -
Phac5g00742 1020 MobiDBLite consensus disorder prediction 150 300 - -
Phac5g00742 1020 CDD mtIF2_IVc 910 992 - -
Phac5g00742 1020 Coils Coil 750 777 - -
Phac5g00742 1020 MobiDBLite consensus disorder prediction 75 96 - -
Phac5g00742 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 667 IPR027417 -
Phac5g00742 1020 Hamap Translation initiation factor IF-2 [infB]. 8 1000 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Phac5g00742 1020 MobiDBLite consensus disorder prediction 244 258 - -
Phac5g00742 1020 PRINTS GTP-binding elongation factor signature 599 608 IPR000795 GO:0003924|GO:0005525
Phac5g00742 1020 PRINTS GTP-binding elongation factor signature 547 557 IPR000795 GO:0003924|GO:0005525
Phac5g00742 1020 PRINTS GTP-binding elongation factor signature 495 508 IPR000795 GO:0003924|GO:0005525
Phac5g00742 1020 PRINTS GTP-binding elongation factor signature 563 574 IPR000795 GO:0003924|GO:0005525
Phac5g00742 1020 MobiDBLite consensus disorder prediction 217 232 - -
Phac5g00742 1020 MobiDBLite consensus disorder prediction 75 135 - -
Phac5g00742 1020 Gene3D Translation factors 667 782 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac5g00742 Phac-Chr5 7148935 7157779 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00742 470 890 Eukaryotic Initiation Factors Gene Family AT1G76810 29.412 1.22e-29 125
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00742 K02519 - gmx:100818840 1600.49